Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 AC011298.2-201ENST00000617989 482 ntBASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 AC073130.3-201ENST00000624389 2278 ntBASIC23.62■■□□□ 1.37
TTC39AQ5SRH9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 AC125437.2-201ENST00000625180 2167 ntBASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 AC004951.3-201ENST00000418645 1148 ntBASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.61■■□□□ 1.37
TTC39AQ5SRH9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 MIR1238-201ENST00000408483 83 ntBASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TTC39AQ5SRH9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 MMP23A-201ENST00000234610 1017 ntBASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AC087499.1-201ENST00000418141 1075 ntBASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AL390955.1-201ENST00000428694 934 ntBASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AC008040.2-201ENST00000461049 708 ntBASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AC130371.2-201ENST00000619443 611 ntBASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.59■■□□□ 1.37
TTC39AQ5SRH9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 AC091390.4-202ENST00000476426 537 ntBASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TTC39AQ5SRH9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.58■■□□□ 1.36
TTC39AQ5SRH9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms