Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 YBX1P10-201ENST00000444752 975 ntBASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 AC141257.4-201ENST00000634557 245 ntBASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 AC136944.6-201ENST00000634818 245 ntBASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.73■□□□□ 0.91
CTC1Q2NKJ3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 AC011298.2-201ENST00000617989 482 ntBASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.72■□□□□ 0.91
CTC1Q2NKJ3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 AC092338.2-201ENST00000568827 1415 ntBASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 TFP1-202ENST00000475455 1573 ntBASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 AC116351.2-201ENST00000606540 1585 ntBASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTC1Q2NKJ3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms