Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
RAE1P78406 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAE1P78406 KRT18P6-201ENST00000555540 1265 ntBASIC18.41■□□□□ 0.54
RAE1P78406 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.41■□□□□ 0.54
RAE1P78406 MTDHP1-201ENST00000605323 784 ntBASIC18.41■□□□□ 0.54
RAE1P78406 AC069544.1-201ENST00000609399 999 ntBASIC18.41■□□□□ 0.54
RAE1P78406 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.41■□□□□ 0.54
RAE1P78406 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RAE1P78406 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAE1P78406 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RAE1P78406 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
RAE1P78406 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAE1P78406 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAE1P78406 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAE1P78406 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAE1P78406 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAE1P78406 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.4■□□□□ 0.54
RAE1P78406 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.4■□□□□ 0.54
RAE1P78406 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.4■□□□□ 0.54
RAE1P78406 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.4■□□□□ 0.54
RAE1P78406 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RAE1P78406 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.4■□□□□ 0.54
RAE1P78406 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAE1P78406 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAE1P78406 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAE1P78406 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAE1P78406 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAE1P78406 NBPF21P-201ENST00000425093 1451 ntBASIC18.39■□□□□ 0.54
RAE1P78406 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAE1P78406 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.39■□□□□ 0.54
RAE1P78406 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RAE1P78406 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAE1P78406 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAE1P78406 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 AC093503.3-201ENST00000624917 2352 ntBASIC18.39■□□□□ 0.53
RAE1P78406 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RAE1P78406 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.39■□□□□ 0.53
RAE1P78406 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAE1P78406 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
RAE1P78406 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAE1P78406 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAE1P78406 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.39■□□□□ 0.53
RAE1P78406 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAE1P78406 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAE1P78406 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAE1P78406 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.38■□□□□ 0.53
RAE1P78406 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 PRKY-204ENST00000533551 1019 ntBASIC18.38■□□□□ 0.53
RAE1P78406 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.38■□□□□ 0.53
RAE1P78406 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAE1P78406 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAE1P78406 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms