Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS2P54278 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS2P54278 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PMS2P54278 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS2P54278 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PMS2P54278 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 AIRN-201ENST00000601203 4374 ntBASIC19.98■□□□□ 0.79
PMS2P54278 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 SLC29A4P1-201ENST00000398760 971 ntBASIC19.98■□□□□ 0.79
PMS2P54278 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.98■□□□□ 0.79
PMS2P54278 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 KRT18P6-201ENST00000555540 1265 ntBASIC19.98■□□□□ 0.79
PMS2P54278 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 AC016405.3-201ENST00000607710 860 ntBASIC19.98■□□□□ 0.79
PMS2P54278 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PMS2P54278 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS2P54278 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PMS2P54278 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.97■□□□□ 0.79
PMS2P54278 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 AC141586.3-201ENST00000562166 1838 ntBASIC19.97■□□□□ 0.79
PMS2P54278 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
PMS2P54278 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PMS2P54278 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.97■□□□□ 0.79
PMS2P54278 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.97■□□□□ 0.79
PMS2P54278 TSPY20P-201ENST00000450910 630 ntBASIC19.97■□□□□ 0.79
PMS2P54278 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.97■□□□□ 0.79
PMS2P54278 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PMS2P54278 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.97■□□□□ 0.79
PMS2P54278 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.97■□□□□ 0.79
PMS2P54278 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.97■□□□□ 0.79
PMS2P54278 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS2P54278 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS2P54278 AC079598.2-202ENST00000546624 1451 ntBASIC19.97■□□□□ 0.79
PMS2P54278 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS2P54278 TEX21P-204ENST00000641479 1693 ntBASIC19.97■□□□□ 0.79
PMS2P54278 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.96■□□□□ 0.79
PMS2P54278 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
PMS2P54278 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 AL162412.1-201ENST00000567129 965 ntBASIC19.96■□□□□ 0.79
PMS2P54278 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.96■□□□□ 0.79
PMS2P54278 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.96■□□□□ 0.79
PMS2P54278 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.96■□□□□ 0.79
PMS2P54278 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PMS2P54278 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.96■□□□□ 0.79
PMS2P54278 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PMS2P54278 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS2P54278 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS2P54278 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms