Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC124283.5-201ENST00000624661 1809 ntBASIC19.76■□□□□ 0.75
ATXN3P54252 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATXN3P54252 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.76■□□□□ 0.75
ATXN3P54252 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 FP700111.2-201ENST00000619190 1892 ntBASIC19.75■□□□□ 0.75
ATXN3P54252 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.75■□□□□ 0.75
ATXN3P54252 AC079598.2-202ENST00000546624 1451 ntBASIC19.75■□□□□ 0.75
ATXN3P54252 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATXN3P54252 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATXN3P54252 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATXN3P54252 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.75■□□□□ 0.75
ATXN3P54252 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.75■□□□□ 0.75
ATXN3P54252 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATXN3P54252 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATXN3P54252 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.75■□□□□ 0.75
ATXN3P54252 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ATXN3P54252 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.75■□□□□ 0.75
ATXN3P54252 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.75■□□□□ 0.75
ATXN3P54252 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.75■□□□□ 0.75
ATXN3P54252 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.74■□□□□ 0.75
ATXN3P54252 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATXN3P54252 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.74■□□□□ 0.75
ATXN3P54252 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.74■□□□□ 0.75
ATXN3P54252 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATXN3P54252 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATXN3P54252 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.74■□□□□ 0.75
ATXN3P54252 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.74■□□□□ 0.75
ATXN3P54252 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.74■□□□□ 0.75
ATXN3P54252 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.74■□□□□ 0.75
ATXN3P54252 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATXN3P54252 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATXN3P54252 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATXN3P54252 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATXN3P54252 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.73■□□□□ 0.75
ATXN3P54252 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.73■□□□□ 0.75
ATXN3P54252 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 AC099778.1-201ENST00000568593 1911 ntBASIC19.73■□□□□ 0.75
ATXN3P54252 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
ATXN3P54252 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
ATXN3P54252 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.73■□□□□ 0.75
ATXN3P54252 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
ATXN3P54252 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.73■□□□□ 0.75
ATXN3P54252 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATXN3P54252 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.73■□□□□ 0.75
ATXN3P54252 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATXN3P54252 KRT8P9-201ENST00000558927 1449 ntBASIC19.73■□□□□ 0.75
ATXN3P54252 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.73■□□□□ 0.75
ATXN3P54252 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATXN3P54252 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.73■□□□□ 0.75
ATXN3P54252 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATXN3P54252 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.72■□□□□ 0.75
ATXN3P54252 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
ATXN3P54252 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATXN3P54252 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.72■□□□□ 0.75
ATXN3P54252 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATXN3P54252 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ATXN3P54252 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.71■□□□□ 0.75
ATXN3P54252 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms