Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LIMK2P53671 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.54■□□□□ 0.72
LIMK2P53671 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK2P53671 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK2P53671 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LIMK2P53671 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.54■□□□□ 0.72
LIMK2P53671 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LIMK2P53671 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIMK2P53671 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
LIMK2P53671 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.53■□□□□ 0.72
LIMK2P53671 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.53■□□□□ 0.72
LIMK2P53671 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
LIMK2P53671 LINC01465-201ENST00000408887 1940 ntBASIC19.53■□□□□ 0.72
LIMK2P53671 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LIMK2P53671 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIMK2P53671 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LIMK2P53671 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.53■□□□□ 0.72
LIMK2P53671 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LIMK2P53671 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.53■□□□□ 0.72
LIMK2P53671 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.53■□□□□ 0.72
LIMK2P53671 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LIMK2P53671 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIMK2P53671 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIMK2P53671 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIMK2P53671 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LIMK2P53671 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIMK2P53671 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.52■□□□□ 0.72
LIMK2P53671 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.52■□□□□ 0.72
LIMK2P53671 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
LIMK2P53671 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.52■□□□□ 0.72
LIMK2P53671 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.52■□□□□ 0.72
LIMK2P53671 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.52■□□□□ 0.72
LIMK2P53671 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 AC120498.8-201ENST00000614275 531 ntBASIC19.52■□□□□ 0.72
LIMK2P53671 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LIMK2P53671 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.52■□□□□ 0.72
LIMK2P53671 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIMK2P53671 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.52■□□□□ 0.71
LIMK2P53671 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.52■□□□□ 0.71
LIMK2P53671 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.52■□□□□ 0.71
LIMK2P53671 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
LIMK2P53671 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.52■□□□□ 0.71
LIMK2P53671 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LIMK2P53671 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LIMK2P53671 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LIMK2P53671 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.51■□□□□ 0.71
LIMK2P53671 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LIMK2P53671 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LIMK2P53671 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.51■□□□□ 0.71
LIMK2P53671 AL390719.1-204ENST00000412397 1219 ntBASIC19.51■□□□□ 0.71
LIMK2P53671 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.51■□□□□ 0.71
LIMK2P53671 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.51■□□□□ 0.71
LIMK2P53671 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LIMK2P53671 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.51■□□□□ 0.71
LIMK2P53671 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LIMK2P53671 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
LIMK2P53671 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.51■□□□□ 0.71
LIMK2P53671 TFP1-202ENST00000475455 1573 ntBASIC19.51■□□□□ 0.71
LIMK2P53671 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.51■□□□□ 0.71
LIMK2P53671 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms