Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
UBE2AP49459 SLC29A4P1-201ENST00000398760 971 ntBASIC12.29□□□□□ -0.44
UBE2AP49459 AL390719.1-204ENST00000412397 1219 ntBASIC12.29□□□□□ -0.44
UBE2AP49459 BX276092.2-201ENST00000417668 665 ntBASIC12.29□□□□□ -0.44
UBE2AP49459 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2AP49459 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UBE2AP49459 AC133552.2-202ENST00000575694 574 ntBASIC12.29□□□□□ -0.44
UBE2AP49459 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2AP49459 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UBE2AP49459 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2AP49459 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2AP49459 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
UBE2AP49459 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2AP49459 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2AP49459 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
UBE2AP49459 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2AP49459 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UBE2AP49459 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UBE2AP49459 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
UBE2AP49459 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2AP49459 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2AP49459 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2AP49459 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBE2AP49459 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2AP49459 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2AP49459 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
UBE2AP49459 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2AP49459 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2AP49459 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
UBE2AP49459 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2AP49459 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2AP49459 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2AP49459 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.27□□□□□ -0.44
UBE2AP49459 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
UBE2AP49459 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
UBE2AP49459 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.27□□□□□ -0.44
UBE2AP49459 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2AP49459 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2AP49459 AC023632.3-201ENST00000521633 145 ntBASIC12.27□□□□□ -0.45
UBE2AP49459 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.27□□□□□ -0.45
UBE2AP49459 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2AP49459 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.27□□□□□ -0.45
UBE2AP49459 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.27□□□□□ -0.45
UBE2AP49459 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.27□□□□□ -0.45
UBE2AP49459 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2AP49459 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
UBE2AP49459 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2AP49459 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2AP49459 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
UBE2AP49459 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
UBE2AP49459 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
UBE2AP49459 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2AP49459 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
UBE2AP49459 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms