Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.22■□□□□ 0.99
HOXC8P31273 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.22■□□□□ 0.99
HOXC8P31273 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.22■□□□□ 0.99
HOXC8P31273 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC8P31273 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC8P31273 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HOXC8P31273 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC8P31273 UPK3BP1-201ENST00000428678 509 ntBASIC21.21■□□□□ 0.99
HOXC8P31273 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC8P31273 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.21■□□□□ 0.99
HOXC8P31273 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.21■□□□□ 0.99
HOXC8P31273 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC8P31273 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 AP000550.4-202ENST00000639755 178 ntBASIC21.21■□□□□ 0.99
HOXC8P31273 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC8P31273 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC8P31273 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC8P31273 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC8P31273 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.2■□□□□ 0.98
HOXC8P31273 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.2■□□□□ 0.98
HOXC8P31273 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.2■□□□□ 0.98
HOXC8P31273 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.2■□□□□ 0.98
HOXC8P31273 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC8P31273 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC8P31273 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC8P31273 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXC8P31273 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXC8P31273 KRT18P38-201ENST00000449496 1282 ntBASIC21.19■□□□□ 0.98
HOXC8P31273 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXC8P31273 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXC8P31273 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXC8P31273 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HOXC8P31273 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.19■□□□□ 0.98
HOXC8P31273 NEK4P2-201ENST00000580004 1012 ntBASIC21.19■□□□□ 0.98
HOXC8P31273 MIR4674-201ENST00000582457 87 ntBASIC21.19■□□□□ 0.98
HOXC8P31273 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXC8P31273 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HOXC8P31273 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC8P31273 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXC8P31273 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXC8P31273 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC8P31273 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.18■□□□□ 0.98
HOXC8P31273 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.18■□□□□ 0.98
HOXC8P31273 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC8P31273 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.18■□□□□ 0.98
HOXC8P31273 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXC8P31273 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC8P31273 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HOXC8P31273 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HOXC8P31273 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HOXC8P31273 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HOXC8P31273 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXC8P31273 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC8P31273 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXC8P31273 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXC8P31273 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXC8P31273 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.17■□□□□ 0.98
HOXC8P31273 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms