Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.72■□□□□ 0.75
NFKB1P19838 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 AC239809.2-201ENST00000415381 517 ntBASIC19.72■□□□□ 0.75
NFKB1P19838 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.72■□□□□ 0.75
NFKB1P19838 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 AC087289.5-201ENST00000586076 3175 ntBASIC19.72■□□□□ 0.75
NFKB1P19838 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.71■□□□□ 0.75
NFKB1P19838 POU5F1P3-201ENST00000428824 1078 ntBASIC19.71■□□□□ 0.75
NFKB1P19838 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.71■□□□□ 0.75
NFKB1P19838 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.71■□□□□ 0.75
NFKB1P19838 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NFKB1P19838 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
NFKB1P19838 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.71■□□□□ 0.75
NFKB1P19838 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.71■□□□□ 0.75
NFKB1P19838 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.71■□□□□ 0.75
NFKB1P19838 SDHAP1-207ENST00000440850 2000 ntBASIC19.71■□□□□ 0.75
NFKB1P19838 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NFKB1P19838 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NFKB1P19838 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NFKB1P19838 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.7■□□□□ 0.74
NFKB1P19838 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NFKB1P19838 AC128676.1-201ENST00000454392 318 ntBASIC19.7■□□□□ 0.74
NFKB1P19838 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.7■□□□□ 0.74
NFKB1P19838 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NFKB1P19838 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
NFKB1P19838 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NFKB1P19838 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.69■□□□□ 0.74
NFKB1P19838 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NFKB1P19838 RN7SL471P-201ENST00000580476 299 ntBASIC19.69■□□□□ 0.74
NFKB1P19838 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 AC004264.1-201ENST00000608354 794 ntBASIC19.69■□□□□ 0.74
NFKB1P19838 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NFKB1P19838 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.69■□□□□ 0.74
NFKB1P19838 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NFKB1P19838 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.69■□□□□ 0.74
NFKB1P19838 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms