Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
XRCC1P18887 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC1P18887 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC1P18887 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC1P18887 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
XRCC1P18887 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.32■□□□□ 0.68
XRCC1P18887 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.32■□□□□ 0.68
XRCC1P18887 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.32■□□□□ 0.68
XRCC1P18887 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC1P18887 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.32■□□□□ 0.68
XRCC1P18887 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.32■□□□□ 0.68
XRCC1P18887 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.32■□□□□ 0.68
XRCC1P18887 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC1P18887 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 AL135905.2-201ENST00000584934 1404 ntBASIC19.32■□□□□ 0.68
XRCC1P18887 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 AC093484.2-201ENST00000580996 2166 ntBASIC19.32■□□□□ 0.68
XRCC1P18887 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC1P18887 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.31■□□□□ 0.68
XRCC1P18887 RPS2P55-201ENST00000397318 883 ntBASIC19.31■□□□□ 0.68
XRCC1P18887 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 AC012618.2-201ENST00000428058 849 ntBASIC19.31■□□□□ 0.68
XRCC1P18887 KRT16P5-201ENST00000455284 522 ntBASIC19.31■□□□□ 0.68
XRCC1P18887 AC107956.1-201ENST00000494359 873 ntBASIC19.31■□□□□ 0.68
XRCC1P18887 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
XRCC1P18887 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.31■□□□□ 0.68
XRCC1P18887 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC1P18887 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.3■□□□□ 0.68
XRCC1P18887 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.3■□□□□ 0.68
XRCC1P18887 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
XRCC1P18887 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 AL596275.1-201ENST00000423464 877 ntBASIC19.3■□□□□ 0.68
XRCC1P18887 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
XRCC1P18887 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 RARRES2P10-201ENST00000564312 460 ntBASIC19.3■□□□□ 0.68
XRCC1P18887 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.3■□□□□ 0.68
XRCC1P18887 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
XRCC1P18887 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC1P18887 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC1P18887 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.29■□□□□ 0.68
XRCC1P18887 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
XRCC1P18887 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC1P18887 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
XRCC1P18887 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
XRCC1P18887 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
XRCC1P18887 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC1P18887 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
XRCC1P18887 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.29■□□□□ 0.68
XRCC1P18887 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
XRCC1P18887 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC1P18887 AC233702.5-201ENST00000584107 538 ntBASIC19.29■□□□□ 0.68
XRCC1P18887 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
XRCC1P18887 AP001412.1-201ENST00000608405 714 ntBASIC19.29■□□□□ 0.68
XRCC1P18887 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
XRCC1P18887 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms