Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 GUSBP6-202ENST00000438529 1198 ntBASIC20.93■□□□□ 0.94
CCDC172P0C7W6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.93■□□□□ 0.94
CCDC172P0C7W6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 MYC-209ENST00000641252 345 ntBASIC20.92■□□□□ 0.94
CCDC172P0C7W6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC172P0C7W6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 AC098818.2-201ENST00000564925 2320 ntBASIC20.91■□□□□ 0.94
CCDC172P0C7W6 AC060766.5-201ENST00000590539 871 ntBASIC20.91■□□□□ 0.94
CCDC172P0C7W6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC172P0C7W6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 LINC01465-201ENST00000408887 1940 ntBASIC20.9■□□□□ 0.94
CCDC172P0C7W6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 AP006587.1-201ENST00000534129 1502 ntBASIC20.9■□□□□ 0.94
CCDC172P0C7W6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC172P0C7W6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC172P0C7W6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC172P0C7W6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC172P0C7W6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms