Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.95■■□□□ 1.1
HOXC6P09630 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC6P09630 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC6P09630 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC6P09630 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 AP000523.1-201ENST00000398242 1049 ntBASIC21.94■■□□□ 1.1
HOXC6P09630 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HOXC6P09630 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.94■■□□□ 1.1
HOXC6P09630 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
HOXC6P09630 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.94■■□□□ 1.1
HOXC6P09630 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC6P09630 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
HOXC6P09630 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC6P09630 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HOXC6P09630 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC6P09630 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC6P09630 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.93■■□□□ 1.1
HOXC6P09630 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC6P09630 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC6P09630 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HOXC6P09630 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.93■■□□□ 1.1
HOXC6P09630 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.93■■□□□ 1.1
HOXC6P09630 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.93■■□□□ 1.1
HOXC6P09630 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HOXC6P09630 NEK4P2-201ENST00000580004 1012 ntBASIC21.93■■□□□ 1.1
HOXC6P09630 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.93■■□□□ 1.1
HOXC6P09630 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.92■■□□□ 1.1
HOXC6P09630 LINC01465-201ENST00000408887 1940 ntBASIC21.92■■□□□ 1.1
HOXC6P09630 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
HOXC6P09630 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.92■■□□□ 1.1
HOXC6P09630 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HOXC6P09630 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.92■■□□□ 1.1
HOXC6P09630 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.92■■□□□ 1.1
HOXC6P09630 AC093458.2-201ENST00000623150 629 ntBASIC21.92■■□□□ 1.1
HOXC6P09630 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.92■■□□□ 1.1
HOXC6P09630 FEM1AP1-201ENST00000431297 1995 ntBASIC21.92■■□□□ 1.1
HOXC6P09630 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HOXC6P09630 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HOXC6P09630 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.92■■□□□ 1.1
HOXC6P09630 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HOXC6P09630 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC6P09630 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HOXC6P09630 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC6P09630 AL450487.1-201ENST00000426799 995 ntBASIC21.91■■□□□ 1.1
HOXC6P09630 TPM4P1-201ENST00000436100 807 ntBASIC21.91■■□□□ 1.1
HOXC6P09630 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.91■■□□□ 1.1
HOXC6P09630 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.91■■□□□ 1.1
HOXC6P09630 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC6P09630 HYMAI.1-201ENST00000620949 238 ntBASIC21.91■■□□□ 1.1
HOXC6P09630 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.91■■□□□ 1.1
HOXC6P09630 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.91■■□□□ 1.1
HOXC6P09630 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC6P09630 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HOXC6P09630 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC6P09630 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HOXC6P09630 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HOXC6P09630 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
HOXC6P09630 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HOXC6P09630 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
HOXC6P09630 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.9■■□□□ 1.1
HOXC6P09630 HCG4P8-203ENST00000443049 980 ntBASIC21.9■■□□□ 1.1
HOXC6P09630 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.9■■□□□ 1.1
HOXC6P09630 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.9■■□□□ 1.1
HOXC6P09630 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.9■■□□□ 1.1
HOXC6P09630 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.9■■□□□ 1.1
HOXC6P09630 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.9■■□□□ 1.1
HOXC6P09630 AC069148.1-201ENST00000608741 768 ntBASIC21.9■■□□□ 1.1
HOXC6P09630 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.9■■□□□ 1.1
HOXC6P09630 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.9■■□□□ 1.1
HOXC6P09630 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
HOXC6P09630 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HOXC6P09630 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HOXC6P09630 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC6P09630 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms