Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC135050.7-201ENST00000624508 2218 ntBASIC16.74■□□□□ 0.27
CSF1P09603 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.74■□□□□ 0.27
CSF1P09603 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.74■□□□□ 0.27
CSF1P09603 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSF1P09603 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CSF1P09603 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 MFSD11-216ENST00000590393 1141 ntBASIC16.74■□□□□ 0.27
CSF1P09603 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.74■□□□□ 0.27
CSF1P09603 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.74■□□□□ 0.27
CSF1P09603 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 AC009113.1-201ENST00000570267 2443 ntBASIC16.74■□□□□ 0.27
CSF1P09603 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1P09603 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CSF1P09603 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 KRT16P6-202ENST00000425692 1426 ntBASIC16.73■□□□□ 0.27
CSF1P09603 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CSF1P09603 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSF1P09603 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 AC007322.1-201ENST00000426983 750 ntBASIC16.73■□□□□ 0.27
CSF1P09603 AC010141.2-201ENST00000452426 721 ntBASIC16.73■□□□□ 0.27
CSF1P09603 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.73■□□□□ 0.27
CSF1P09603 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.73■□□□□ 0.27
CSF1P09603 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.73■□□□□ 0.27
CSF1P09603 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.73■□□□□ 0.27
CSF1P09603 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.73■□□□□ 0.27
CSF1P09603 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.73■□□□□ 0.27
CSF1P09603 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 AC005332.8-201ENST00000622750 2735 ntBASIC16.73■□□□□ 0.27
CSF1P09603 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSF1P09603 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSF1P09603 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
CSF1P09603 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.73■□□□□ 0.27
CSF1P09603 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.73■□□□□ 0.27
CSF1P09603 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CSF1P09603 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.73■□□□□ 0.27
CSF1P09603 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.72■□□□□ 0.27
CSF1P09603 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 SLC29A4P1-201ENST00000398760 971 ntBASIC16.72■□□□□ 0.27
CSF1P09603 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.72■□□□□ 0.27
CSF1P09603 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 AC083906.2-201ENST00000511578 360 ntBASIC16.72■□□□□ 0.27
CSF1P09603 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 AC104187.1-201ENST00000607510 612 ntBASIC16.72■□□□□ 0.27
CSF1P09603 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.72■□□□□ 0.27
CSF1P09603 AC104581.1-202ENST00000635932 2618 ntBASIC16.72■□□□□ 0.27
CSF1P09603 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.72■□□□□ 0.27
CSF1P09603 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.72■□□□□ 0.27
CSF1P09603 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.72■□□□□ 0.27
CSF1P09603 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CSF1P09603 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSF1P09603 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.71■□□□□ 0.27
CSF1P09603 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.71■□□□□ 0.27
CSF1P09603 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSF1P09603 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms