Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.2■□□□□ 0.98
CLTAP09496 AC125437.2-201ENST00000625180 2167 ntBASIC21.2■□□□□ 0.98
CLTAP09496 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CLTAP09496 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CLTAP09496 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.2■□□□□ 0.98
CLTAP09496 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.2■□□□□ 0.98
CLTAP09496 AL445675.2-201ENST00000620291 557 ntBASIC21.2■□□□□ 0.98
CLTAP09496 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.2■□□□□ 0.98
CLTAP09496 KRT17P2-201ENST00000300992 1314 ntBASIC21.2■□□□□ 0.98
CLTAP09496 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLTAP09496 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.2■□□□□ 0.98
CLTAP09496 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.2■□□□□ 0.98
CLTAP09496 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLTAP09496 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.2■□□□□ 0.98
CLTAP09496 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.19■□□□□ 0.98
CLTAP09496 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.19■□□□□ 0.98
CLTAP09496 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CLTAP09496 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.19■□□□□ 0.98
CLTAP09496 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.19■□□□□ 0.98
CLTAP09496 MIR4785-201ENST00000585005 73 ntBASIC21.19■□□□□ 0.98
CLTAP09496 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CLTAP09496 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.19■□□□□ 0.98
CLTAP09496 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.19■□□□□ 0.98
CLTAP09496 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.19■□□□□ 0.98
CLTAP09496 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLTAP09496 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.19■□□□□ 0.98
CLTAP09496 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.18■□□□□ 0.98
CLTAP09496 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CLTAP09496 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.18■□□□□ 0.98
CLTAP09496 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CLTAP09496 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.18■□□□□ 0.98
CLTAP09496 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CLTAP09496 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.18■□□□□ 0.98
CLTAP09496 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.18■□□□□ 0.98
CLTAP09496 CR392000.1-201ENST00000624770 1228 ntBASIC21.18■□□□□ 0.98
CLTAP09496 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.18■□□□□ 0.98
CLTAP09496 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 KRT16P1-201ENST00000399124 1418 ntBASIC21.18■□□□□ 0.98
CLTAP09496 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.18■□□□□ 0.98
CLTAP09496 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CLTAP09496 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLTAP09496 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLTAP09496 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLTAP09496 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.17■□□□□ 0.98
CLTAP09496 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLTAP09496 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLTAP09496 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLTAP09496 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLTAP09496 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLTAP09496 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.16■□□□□ 0.98
CLTAP09496 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.16■□□□□ 0.98
CLTAP09496 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.16■□□□□ 0.98
CLTAP09496 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
CLTAP09496 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLTAP09496 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.16■□□□□ 0.98
CLTAP09496 AL355355.2-201ENST00000442321 338 ntBASIC21.16■□□□□ 0.98
CLTAP09496 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms