Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KRT18P68-201ENST00000392293 1000 ntBASIC16.1■□□□□ 0.17
CTSDP07339 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.1■□□□□ 0.17
CTSDP07339 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.1■□□□□ 0.17
CTSDP07339 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.1■□□□□ 0.17
CTSDP07339 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.1■□□□□ 0.17
CTSDP07339 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CTSDP07339 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CTSDP07339 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CTSDP07339 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.09■□□□□ 0.17
CTSDP07339 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.09■□□□□ 0.17
CTSDP07339 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.09■□□□□ 0.17
CTSDP07339 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.09■□□□□ 0.17
CTSDP07339 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.09■□□□□ 0.17
CTSDP07339 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.09■□□□□ 0.17
CTSDP07339 AC013268.1-206ENST00000638368 961 ntBASIC16.09■□□□□ 0.17
CTSDP07339 AC112229.1-201ENST00000639295 961 ntBASIC16.09■□□□□ 0.17
CTSDP07339 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CTSDP07339 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.09■□□□□ 0.17
CTSDP07339 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CTSDP07339 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 AC018553.1-201ENST00000616682 1458 ntBASIC16.09■□□□□ 0.17
CTSDP07339 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.09■□□□□ 0.17
CTSDP07339 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTSDP07339 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.08■□□□□ 0.17
CTSDP07339 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSDP07339 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSDP07339 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.08■□□□□ 0.17
CTSDP07339 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CTSDP07339 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSDP07339 ZNF815P-204ENST00000434898 1737 ntBASIC16.08■□□□□ 0.17
CTSDP07339 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.08■□□□□ 0.17
CTSDP07339 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSDP07339 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CTSDP07339 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTSDP07339 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.08■□□□□ 0.17
CTSDP07339 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.08■□□□□ 0.17
CTSDP07339 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CTSDP07339 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 RARRES2P4-201ENST00000514074 484 ntBASIC16.08■□□□□ 0.16
CTSDP07339 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.08■□□□□ 0.16
CTSDP07339 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTSDP07339 BICD1-207ENST00000551848 1962 ntBASIC16.07■□□□□ 0.16
CTSDP07339 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CTSDP07339 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.07■□□□□ 0.16
CTSDP07339 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CTSDP07339 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CTSDP07339 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
CTSDP07339 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.07■□□□□ 0.16
CTSDP07339 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.07■□□□□ 0.16
CTSDP07339 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.07■□□□□ 0.16
CTSDP07339 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CTSDP07339 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTSDP07339 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms