Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.78■■□□□ 1.08
GGPS1O95749 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.78■■□□□ 1.08
GGPS1O95749 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GGPS1O95749 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.78■■□□□ 1.08
GGPS1O95749 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.78■■□□□ 1.08
GGPS1O95749 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.78■■□□□ 1.08
GGPS1O95749 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.78■■□□□ 1.08
GGPS1O95749 AC128688.1-201ENST00000487626 519 ntBASIC21.78■■□□□ 1.08
GGPS1O95749 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
GGPS1O95749 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.78■■□□□ 1.08
GGPS1O95749 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.78■■□□□ 1.08
GGPS1O95749 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GGPS1O95749 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GGPS1O95749 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GGPS1O95749 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GGPS1O95749 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
GGPS1O95749 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 KRT18P35-201ENST00000510488 1269 ntBASIC21.77■■□□□ 1.08
GGPS1O95749 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.77■■□□□ 1.08
GGPS1O95749 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.77■■□□□ 1.08
GGPS1O95749 FAM87A-204ENST00000613235 858 ntBASIC21.77■■□□□ 1.08
GGPS1O95749 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.77■■□□□ 1.08
GGPS1O95749 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
GGPS1O95749 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GGPS1O95749 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
GGPS1O95749 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
GGPS1O95749 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
GGPS1O95749 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
GGPS1O95749 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
GGPS1O95749 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.76■■□□□ 1.07
GGPS1O95749 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.76■■□□□ 1.07
GGPS1O95749 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
GGPS1O95749 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
GGPS1O95749 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GGPS1O95749 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 LIN28AP1-201ENST00000429574 405 ntBASIC21.75■■□□□ 1.07
GGPS1O95749 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.75■■□□□ 1.07
GGPS1O95749 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.75■■□□□ 1.07
GGPS1O95749 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.75■■□□□ 1.07
GGPS1O95749 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.75■■□□□ 1.07
GGPS1O95749 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.75■■□□□ 1.07
GGPS1O95749 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GGPS1O95749 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GGPS1O95749 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GGPS1O95749 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GGPS1O95749 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GGPS1O95749 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GGPS1O95749 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms