Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
MSI1O43347 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.16■□□□□ 0.82
MSI1O43347 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.16■□□□□ 0.82
MSI1O43347 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.16■□□□□ 0.82
MSI1O43347 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.16■□□□□ 0.82
MSI1O43347 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.16■□□□□ 0.82
MSI1O43347 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 AC131212.4-201ENST00000623606 975 ntBASIC20.16■□□□□ 0.82
MSI1O43347 AL031985.4-201ENST00000642138 673 ntBASIC20.16■□□□□ 0.82
MSI1O43347 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MSI1O43347 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.16■□□□□ 0.82
MSI1O43347 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MSI1O43347 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSI1O43347 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.16■□□□□ 0.82
MSI1O43347 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.16■□□□□ 0.82
MSI1O43347 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.16■□□□□ 0.82
MSI1O43347 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MSI1O43347 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MSI1O43347 MESTP1-201ENST00000404287 994 ntBASIC20.15■□□□□ 0.82
MSI1O43347 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.15■□□□□ 0.82
MSI1O43347 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MSI1O43347 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.15■□□□□ 0.82
MSI1O43347 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.15■□□□□ 0.82
MSI1O43347 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.15■□□□□ 0.82
MSI1O43347 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.15■□□□□ 0.82
MSI1O43347 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.15■□□□□ 0.82
MSI1O43347 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
MSI1O43347 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.15■□□□□ 0.82
MSI1O43347 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
MSI1O43347 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.15■□□□□ 0.82
MSI1O43347 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSI1O43347 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
MSI1O43347 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
MSI1O43347 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.14■□□□□ 0.82
MSI1O43347 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MSI1O43347 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
MSI1O43347 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.14■□□□□ 0.81
MSI1O43347 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
MSI1O43347 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.14■□□□□ 0.81
MSI1O43347 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.14■□□□□ 0.81
MSI1O43347 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.14■□□□□ 0.81
MSI1O43347 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
MSI1O43347 AC011506.1-201ENST00000474329 610 ntBASIC20.14■□□□□ 0.81
MSI1O43347 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.14■□□□□ 0.81
MSI1O43347 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
MSI1O43347 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSI1O43347 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MSI1O43347 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MSI1O43347 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MSI1O43347 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.13■□□□□ 0.81
MSI1O43347 Z85996.1-201ENST00000494644 937 ntBASIC20.13■□□□□ 0.81
MSI1O43347 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.13■□□□□ 0.81
MSI1O43347 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MSI1O43347 AL160286.2-201ENST00000567150 934 ntBASIC20.13■□□□□ 0.81
MSI1O43347 AC026271.3-201ENST00000571884 352 ntBASIC20.13■□□□□ 0.81
MSI1O43347 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.13■□□□□ 0.81
MSI1O43347 MIR6786-201ENST00000616843 113 ntBASIC20.13■□□□□ 0.81
MSI1O43347 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.13■□□□□ 0.81
MSI1O43347 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.13■□□□□ 0.81
MSI1O43347 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.13■□□□□ 0.81
MSI1O43347 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MSI1O43347 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MSI1O43347 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.13■□□□□ 0.81
MSI1O43347 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.13■□□□□ 0.81
MSI1O43347 RCC2P6-201ENST00000526625 1557 ntBASIC20.12■□□□□ 0.81
MSI1O43347 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MSI1O43347 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms