Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.58■□□□□ 0.4
SMAD9O15198 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SMAD9O15198 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 AL158047.1-201ENST00000445918 881 ntBASIC17.58■□□□□ 0.4
SMAD9O15198 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.58■□□□□ 0.4
SMAD9O15198 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.58■□□□□ 0.4
SMAD9O15198 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.58■□□□□ 0.4
SMAD9O15198 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.58■□□□□ 0.4
SMAD9O15198 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
SMAD9O15198 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMAD9O15198 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SMAD9O15198 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMAD9O15198 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.57■□□□□ 0.4
SMAD9O15198 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD9O15198 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMAD9O15198 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD9O15198 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.57■□□□□ 0.4
SMAD9O15198 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMAD9O15198 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMAD9O15198 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMAD9O15198 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SMAD9O15198 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.57■□□□□ 0.4
SMAD9O15198 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.57■□□□□ 0.4
SMAD9O15198 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD9O15198 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD9O15198 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMAD9O15198 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SMAD9O15198 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD9O15198 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMAD9O15198 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMAD9O15198 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.56■□□□□ 0.4
SMAD9O15198 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD9O15198 YBX1P10-201ENST00000444752 975 ntBASIC17.56■□□□□ 0.4
SMAD9O15198 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.56■□□□□ 0.4
SMAD9O15198 AC110285.5-201ENST00000611501 352 ntBASIC17.56■□□□□ 0.4
SMAD9O15198 FAM197Y4-202ENST00000622692 608 ntBASIC17.56■□□□□ 0.4
SMAD9O15198 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.56■□□□□ 0.4
SMAD9O15198 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMAD9O15198 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD9O15198 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.55■□□□□ 0.4
SMAD9O15198 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 AC120498.9-201ENST00000339021 3867 ntBASIC17.55■□□□□ 0.4
SMAD9O15198 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMAD9O15198 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.55■□□□□ 0.4
SMAD9O15198 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.55■□□□□ 0.4
SMAD9O15198 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.55■□□□□ 0.4
SMAD9O15198 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.55■□□□□ 0.4
SMAD9O15198 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMAD9O15198 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.55■□□□□ 0.4
SMAD9O15198 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.55■□□□□ 0.4
SMAD9O15198 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMAD9O15198 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SMAD9O15198 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.55■□□□□ 0.4
SMAD9O15198 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.55■□□□□ 0.4
SMAD9O15198 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD9O15198 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.55■□□□□ 0.4
SMAD9O15198 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMAD9O15198 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SMAD9O15198 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SMAD9O15198 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD9O15198 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms