Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCP4L1A6NKN8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 AL353803.4-201ENST00000565882 1934 ntBASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCP4L1A6NKN8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
PCP4L1A6NKN8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 AC015813.7-201ENST00000623294 581 ntBASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCP4L1A6NKN8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.21■□□□□ 0.02
PCP4L1A6NKN8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCP4L1A6NKN8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCP4L1A6NKN8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCP4L1A6NKN8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.02
PCP4L1A6NKN8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 PCDHB17P-201ENST00000539533 2393 ntBASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms