Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HMX3A6NHT5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMX3A6NHT5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 AC142381.2-201ENST00000566120 298 ntBASIC16.79■□□□□ 0.28
HMX3A6NHT5 MIR2861-201ENST00000636310 90 ntBASIC16.79■□□□□ 0.28
HMX3A6NHT5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 Z98044.1-201ENST00000632503 1764 ntBASIC16.79■□□□□ 0.28
HMX3A6NHT5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.79■□□□□ 0.28
HMX3A6NHT5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMX3A6NHT5 AC009237.3-201ENST00000393279 1427 ntBASIC16.79■□□□□ 0.28
HMX3A6NHT5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMX3A6NHT5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HMX3A6NHT5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMX3A6NHT5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMX3A6NHT5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMX3A6NHT5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.77■□□□□ 0.28
HMX3A6NHT5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMX3A6NHT5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMX3A6NHT5 DPP3P2-201ENST00000416030 1696 ntBASIC16.77■□□□□ 0.28
HMX3A6NHT5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
HMX3A6NHT5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMX3A6NHT5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMX3A6NHT5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.77■□□□□ 0.27
HMX3A6NHT5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.77■□□□□ 0.27
HMX3A6NHT5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMX3A6NHT5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.77■□□□□ 0.27
HMX3A6NHT5 AC093525.10-201ENST00000625130 1569 ntBASIC16.77■□□□□ 0.27
HMX3A6NHT5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMX3A6NHT5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.76■□□□□ 0.27
HMX3A6NHT5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms