Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 AC120498.9-201ENST00000339021 3867 ntBASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 KRT8P8-201ENST00000434750 1448 ntBASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 UNC93B4-201ENST00000505679 747 ntBASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 AL121829.2-201ENST00000620908 328 ntBASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM49BA6NDI0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 KRT18P16-201ENST00000510337 1294 ntBASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM49BA6NDI0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 UNC93B5-201ENST00000530315 699 ntBASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 AC008403.3-201ENST00000598924 454 ntBASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM49BA6NDI0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM49BA6NDI0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.33■■□□□ 1
TRIM49BA6NDI0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms