Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 AC123595.1-201ENST00000440769 1046 ntBASIC16.91■□□□□ 0.3
SHISA3A0PJX4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 AC020916.1-201ENST00000587762 1774 ntBASIC16.91■□□□□ 0.3
SHISA3A0PJX4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHISA3A0PJX4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 MCRIP2P1-201ENST00000394346 511 ntBASIC16.9■□□□□ 0.3
SHISA3A0PJX4 YBX1P1-201ENST00000445822 960 ntBASIC16.9■□□□□ 0.3
SHISA3A0PJX4 KRT18P14-201ENST00000534205 1250 ntBASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AC010536.3-201ENST00000620306 533 ntBASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 SDHAP1-207ENST00000440850 2000 ntBASIC16.9■□□□□ 0.3
SHISA3A0PJX4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.9■□□□□ 0.3
SHISA3A0PJX4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.89■□□□□ 0.3
SHISA3A0PJX4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 AL162412.1-201ENST00000567129 965 ntBASIC16.89■□□□□ 0.29
SHISA3A0PJX4 MFSD11-216ENST00000590393 1141 ntBASIC16.89■□□□□ 0.29
SHISA3A0PJX4 AC005837.3-201ENST00000612163 286 ntBASIC16.89■□□□□ 0.29
SHISA3A0PJX4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHISA3A0PJX4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms