Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TRAV8-4A0A0B4J246 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV8-4A0A0B4J246 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 KRT18P68-201ENST00000392293 1000 ntBASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 AC106820.2-201ENST00000563775 3264 ntBASIC13.58□□□□□ -0.24
TRAV8-4A0A0B4J246 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AC007613.1-201ENST00000572811 2597 ntBASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AL032819.2-201ENST00000624543 2162 ntBASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AL512625.2-201ENST00000417533 625 ntBASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AL589743.5-201ENST00000616611 1050 ntBASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV8-4A0A0B4J246 AC099778.1-201ENST00000568593 1911 ntBASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 CYP2T1P-201ENST00000432607 1285 ntBASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 AC022517.1-201ENST00000592429 346 ntBASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 AC105020.6-201ENST00000621523 1217 ntBASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV8-4A0A0B4J246 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms