Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 RARRES2P6-201ENST00000567333 442 ntBASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC005181.1-201ENST00000604782 1256 ntBASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 AL133373.2-201ENST00000623187 2828 ntBASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 GPX1P1-201ENST00000388829 606 ntBASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 LSM12P1-201ENST00000411836 588 ntBASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-7A0A0A0MS04 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC133552.2-202ENST00000575694 574 ntBASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRBV6-7A0A0A0MS04 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC090164.3-201ENST00000610780 2143 ntBASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 NOC2LP1-202ENST00000452600 2235 ntBASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV6-7A0A0A0MS04 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 BICD1-207ENST00000551848 1962 ntBASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 AL162430.1-201ENST00000480705 870 ntBASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms