Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 PARM1-201ENST00000307428 5011 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 DAZ3-203ENST00000446723 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 DAZ2-209ENST00000449947 3372 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 AC005304.2-201ENST00000580134 1982 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 AC138915.1-201ENST00000565427 1685 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 WISP1-202ENST00000250160 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 GTF2H3-214ENST00000618160 3252 ntTSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.97□□□□□ -0.97
HOXD11P31277 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC8.97□□□□□ -0.97
HOXD11P31277 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC8.97□□□□□ -0.97
HOXD11P31277 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.97
HOXD11P31277 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.96□□□□□ -0.97
HOXD11P31277 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.97
HOXD11P31277 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
HOXD11P31277 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
HOXD11P31277 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
HOXD11P31277 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
HOXD11P31277 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
HOXD11P31277 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC8.96□□□□□ -0.97
HOXD11P31277 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.96□□□□□ -0.97
HOXD11P31277 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.96□□□□□ -0.97
HOXD11P31277 ADAM30-201ENST00000369400 2963 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
HOXD11P31277 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
HOXD11P31277 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
HOXD11P31277 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.96□□□□□ -0.97
HOXD11P31277 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
HOXD11P31277 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 PCNX2-205ENST00000430153 1982 ntTSL 5 BASIC8.96□□□□□ -0.98
HOXD11P31277 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 Y_RNA.328-201ENST00000365208 113 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.96□□□□□ -0.98
HOXD11P31277 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 RNU6-1286P-201ENST00000383871 107 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 Y_RNA.572-201ENST00000384757 98 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
HOXD11P31277 RPL12P10-201ENST00000413498 498 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 RPL19P21-201ENST00000424919 591 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 ENPP7P2-201ENST00000462675 943 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 RPL21P6-201ENST00000479171 504 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 CREM-238ENST00000488741 651 ntTSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 RN7SL649P-201ENST00000496974 275 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 AC093162.2-201ENST00000501107 704 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.96□□□□□ -0.98
HOXD11P31277 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.96□□□□□ -0.98
HOXD11P31277 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.96□□□□□ -0.98
HOXD11P31277 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.96□□□□□ -0.98
HOXD11P31277 BCAP31P2-201ENST00000563143 399 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 BCAP31P1-201ENST00000565437 385 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC8.96□□□□□ -0.98
HOXD11P31277 CLEC4M-209ENST00000596707 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 AC123786.2-201ENST00000603459 275 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC8.96□□□□□ -0.98
HOXD11P31277 AL391903.2-201ENST00000614532 247 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.96□□□□□ -0.98
HOXD11P31277 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.96□□□□□ -0.98
HOXD11P31277 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
HOXD11P31277 ADGRG2-204ENST00000357544 4678 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.96□□□□□ -0.98
HOXD11P31277 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 AF121897.1-201ENST00000411867 3980 ntBASIC8.96□□□□□ -0.98
HOXD11P31277 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HOXD11P31277 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
HOXD11P31277 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 GMEB1-203ENST00000373816 6410 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 TAL2-201ENST00000334077 656 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
HOXD11P31277 RNU6-728P-201ENST00000365375 104 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 SNORA51.5-201ENST00000384126 131 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 AL136968.2-201ENST00000407959 354 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 AC130472.1-201ENST00000427885 309 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 AL354983.1-201ENST00000434580 906 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 AC136896.1-201ENST00000438334 547 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 284.7 ms