RNA–Protein interactions for RNA: ENST00000365375.1

RNU6-728P-201, Transcript of RNA, U6 small nuclear 728, pseudogene, humanhuman

BASIC

Gene RNU6-728P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-728P-201ENST00000365375 AEBP2Q6ZN18 517 aaPredicted RBP14.17□□□□□ -0.14
RNU6-728P-201ENST00000365375 CHIC1Q5VXU3 224 aa13.16□□□□□ -0.3
RNU6-728P-201ENST00000365375 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
RNU6-728P-201ENST00000365375 PHF23Q9BUL5 403 aaPredicted RBP11.92□□□□□ -0.5
RNU6-728P-201ENST00000365375 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
RNU6-728P-201ENST00000365375 FOXD1Q16676 465 aa11.44□□□□□ -0.58
RNU6-728P-201ENST00000365375 MSH5O43196 834 aa10.92□□□□□ -0.66
RNU6-728P-201ENST00000365375 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
RNU6-728P-201ENST00000365375 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
RNU6-728P-201ENST00000365375 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
RNU6-728P-201ENST00000365375 ADRA2BP18089 450 aa10.15□□□□□ -0.78
RNU6-728P-201ENST00000365375 CACNB1Q02641 598 aaPredicted RBP9.83□□□□□ -0.84
RNU6-728P-201ENST00000365375 MAPK8IP2Q13387 824 aaPredicted RBP9.52□□□□□ -0.89
RNU6-728P-201ENST00000365375 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
RNU6-728P-201ENST00000365375 RNF39Q9H2S5 420 aa9.28□□□□□ -0.92
RNU6-728P-201ENST00000365375 SCAF1Q9H7N4 1312 aaKnown RBP9.22□□□□□ -0.93
RNU6-728P-201ENST00000365375 DCAF8L1A6NGE4 600 aa9.2□□□□□ -0.94
RNU6-728P-201ENST00000365375 POTEHQ6S545 545 aa9.18□□□□□ -0.94
RNU6-728P-201ENST00000365375 C1QBPQ07021 282 aaKnown RBP9.08□□□□□ -0.96
RNU6-728P-201ENST00000365375 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
RNU6-728P-201ENST00000365375 HOXD11P31277 338 aaPredicted RBP8.95□□□□□ -0.98
RNU6-728P-201ENST00000365375 CNKSR2Q8WXI2 1034 aa8.9□□□□□ -0.98
RNU6-728P-201ENST00000365375 RNF216Q9NWF9 866 aaPredicted RBP8.84□□□□□ -0.99
RNU6-728P-201ENST00000365375 DNAJC5BQ9UF47 199 aa8.68□□□□□ -1.02
RNU6-728P-201ENST00000365375 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
RNU6-728P-201ENST00000365375 NPM3O75607 178 aaKnown RBP8.6□□□□□ -1.03
RNU6-728P-201ENST00000365375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.49□□□□□ -1.05
RNU6-728P-201ENST00000365375 DSG3P32926 999 aa8.47□□□□□ -1.05
RNU6-728P-201ENST00000365375 KCNA4P22459 653 aa8.38□□□□□ -1.07
RNU6-728P-201ENST00000365375 SPINK5Q9NQ38 1064 aaPredicted RBP8.36□□□□□ -1.07
RNU6-728P-201ENST00000365375 CAPN15O75808 1086 aa8.35□□□□□ -1.07
RNU6-728P-201ENST00000365375 U3KPZ7 1027 aaPredicted RBP8.34□□□□□ -1.07
RNU6-728P-201ENST00000365375 SP7Q8TDD2 431 aaPredicted RBP8.27□□□□□ -1.09
RNU6-728P-201ENST00000365375 SLC4A2P04920 1241 aa8.25□□□□□ -1.09
RNU6-728P-201ENST00000365375 CHRDL2Q6WN34 429 aa8.19□□□□□ -1.1
RNU6-728P-201ENST00000365375 ABCB7O75027 752 aa8.12□□□□□ -1.11
RNU6-728P-201ENST00000365375 TRHP20396 242 aaPredicted RBP8.07□□□□□ -1.12
RNU6-728P-201ENST00000365375 RBM42Q9BTD8 480 aaKnown RBP8.05□□□□□ -1.12
RNU6-728P-201ENST00000365375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8□□□□□ -1.13
RNU6-728P-201ENST00000365375 APLP2Q06481 763 aa8□□□□□ -1.13
RNU6-728P-201ENST00000365375 HNRNPUL2Q1KMD3 747 aaKnown RBP8□□□□□ -1.13
RNU6-728P-201ENST00000365375 ZNF219Q9P2Y4 722 aaPredicted RBP8□□□□□ -1.13
RNU6-728P-201ENST00000365375 SAMD1Q6SPF0 538 aaPredicted RBP7.97□□□□□ -1.13
RNU6-728P-201ENST00000365375 MYCNP04198 464 aaPredicted RBP7.92□□□□□ -1.14
RNU6-728P-201ENST00000365375 HAX1O00165 279 aa7.91□□□□□ -1.14
RNU6-728P-201ENST00000365375 PLSCR2Q9NRY7 297 aa7.87□□□□□ -1.15
RNU6-728P-201ENST00000365375 SLC4A1APQ9BWU0 796 aaKnown RBP7.86□□□□□ -1.15
RNU6-728P-201ENST00000365375 PIP4P2Q8N4L2 257 aa7.85□□□□□ -1.15
RNU6-728P-201ENST00000365375 POLA2Q14181 598 aa7.81□□□□□ -1.16
RNU6-728P-201ENST00000365375 FOXD4L1Q9NU39 408 aa7.81□□□□□ -1.16
RNU6-728P-201ENST00000365375 EVX2Q03828 476 aa7.8□□□□□ -1.16
RNU6-728P-201ENST00000365375 ATF5Q9Y2D1 282 aaPredicted RBP7.79□□□□□ -1.16
RNU6-728P-201ENST00000365375 LHX8Q68G74 356 aa7.75□□□□□ -1.17
RNU6-728P-201ENST00000365375 ZBTB22O15209 634 aa7.73□□□□□ -1.17
RNU6-728P-201ENST00000365375 AKT1S1Q96B36 256 aa7.73□□□□□ -1.17
RNU6-728P-201ENST00000365375 REM2Q8IYK8 340 aaPredicted RBP7.69□□□□□ -1.18
RNU6-728P-201ENST00000365375 FXR2P51116 673 aaKnown RBP eCLIP7.68□□□□□ -1.18
RNU6-728P-201ENST00000365375 PITPNM1O00562 1244 aa7.62□□□□□ -1.19
RNU6-728P-201ENST00000365375 ZBTB12Q9Y330 459 aaPredicted RBP7.61□□□□□ -1.19
RNU6-728P-201ENST00000365375 ATXN8OSP0DMR3 200 aa7.57□□□□□ -1.2
RNU6-728P-201ENST00000365375 OSCARQ8IYS5 282 aa7.57□□□□□ -1.2
RNU6-728P-201ENST00000365375 GABBR2O75899 941 aa7.54□□□□□ -1.2
RNU6-728P-201ENST00000365375 C19orf67A6NJJ6 358 aa7.46□□□□□ -1.22
RNU6-728P-201ENST00000365375 MKRN4PQ13434 485 aaPredicted RBP7.44□□□□□ -1.22
RNU6-728P-201ENST00000365375 PRKAR2AP13861 404 aaKnown RBP7.42□□□□□ -1.22
RNU6-728P-201ENST00000365375 SPDYE2BA6NHP3 402 aa7.4□□□□□ -1.22
RNU6-728P-201ENST00000365375 POTEIP0CG38 1075 aa7.4□□□□□ -1.22
RNU6-728P-201ENST00000365375 SPDYE6P0CI01 402 aa7.4□□□□□ -1.22
RNU6-728P-201ENST00000365375 SPDYE2Q495Y8 402 aa7.4□□□□□ -1.22
RNU6-728P-201ENST00000365375 FBLN2P98095 1184 aa7.39□□□□□ -1.23
RNU6-728P-201ENST00000365375 POTEMA6NI47 508 aa7.34□□□□□ -1.23
RNU6-728P-201ENST00000365375 SSUH2Q9Y2M2 353 aa7.34□□□□□ -1.23
RNU6-728P-201ENST00000365375 CSRNP3Q8WYN3 585 aa7.32□□□□□ -1.24
RNU6-728P-201ENST00000365375 POTEGQ6S5H5 508 aa7.29□□□□□ -1.24
RNU6-728P-201ENST00000365375 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
RNU6-728P-201ENST00000365375 SPDYE1Q8NFV5 336 aaPredicted RBP7.26□□□□□ -1.25
RNU6-728P-201ENST00000365375 CLEC11AQ9Y240 323 aa7.26□□□□□ -1.25
RNU6-728P-201ENST00000365375 OTUD5Q96G74 571 aa7.25□□□□□ -1.25
RNU6-728P-201ENST00000365375 CHADLQ6NUI6 762 aa7.22□□□□□ -1.25
RNU6-728P-201ENST00000365375 PABPN1Q86U42 306 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNU6-728P-201ENST00000365375 PCDH10Q9P2E7 1040 aa7.2□□□□□ -1.26
RNU6-728P-201ENST00000365375 DCBLD2Q96PD2 775 aa7.18□□□□□ -1.26
RNU6-728P-201ENST00000365375 POTEB2H3BUK9 544 aa7.15□□□□□ -1.26
RNU6-728P-201ENST00000365375 CD44P16070 742 aaKnown RBP7.13□□□□□ -1.27
RNU6-728P-201ENST00000365375 PRR29P0C7W0 189 aa7.12□□□□□ -1.27
RNU6-728P-201ENST00000365375 EHMT2Q96KQ7 1210 aa7.11□□□□□ -1.27
RNU6-728P-201ENST00000365375 CLCN6P51797 869 aa7.09□□□□□ -1.27
RNU6-728P-201ENST00000365375 FARP1Q9Y4F1 1045 aaPredicted RBP7.04□□□□□ -1.28
RNU6-728P-201ENST00000365375 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
RNU6-728P-201ENST00000365375 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
RNU6-728P-201ENST00000365375 CREBZFQ9NS37 354 aa6.99□□□□□ -1.29
RNU6-728P-201ENST00000365375 GALR2O43603 387 aaPredicted RBP6.97□□□□□ -1.29
RNU6-728P-201ENST00000365375 ZNF579Q8NAF0 562 aaKnown RBP6.97□□□□□ -1.29
RNU6-728P-201ENST00000365375 FAM163AQ96GL9 167 aaPredicted RBP6.97□□□□□ -1.29
RNU6-728P-201ENST00000365375 STAG3Q9UJ98 1225 aa6.96□□□□□ -1.3
RNU6-728P-201ENST00000365375 POTEJP0CG39 1038 aa6.93□□□□□ -1.3
RNU6-728P-201ENST00000365375 ZRANB1Q9UGI0 708 aa6.93□□□□□ -1.3
RNU6-728P-201ENST00000365375 PELP1Q8IZL8 1130 aaKnown RBP6.92□□□□□ -1.3
RNU6-728P-201ENST00000365375 MNX1P50219 401 aaPredicted RBP6.9□□□□□ -1.3
RNU6-728P-201ENST00000365375 PROM2Q8N271 834 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms