Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC073488.2-201ENST00000631903 751 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AL137003.2-201ENST00000606924 2538 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 OR8B9P-202ENST00000642028 5216 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 THAP12P1-201ENST00000398672 2203 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AP002800.1-201ENST00000624982 2225 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AC018688.1-201ENST00000636528 1754 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 RN7SKP23-201ENST00000625159 4301 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 DDX18P3-201ENST00000404856 2007 ntBASIC3.94□□□□□ -1.78
KRTAP3-1Q9BYR8 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 SF3A3P1-201ENST00000446317 1477 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AP003119.3-201ENST00000566747 4192 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 MFSD8-218ENST00000641186 4448 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 Y_RNA.65-201ENST00000362846 100 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RACK1-201ENST00000376817 965 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RNU6-611P-201ENST00000384276 104 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 Y_RNA.471-201ENST00000384312 102 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RNA5SP36-201ENST00000410197 133 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RNA5SP178-201ENST00000410380 128 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RPL21P24-201ENST00000413752 448 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 YWHAZP3-201ENST00000415292 738 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 SYF2P2-201ENST00000417620 583 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RAC1P4-201ENST00000419413 579 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AL022100.1-202ENST00000421214 548 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AL360081.1-201ENST00000428299 555 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 DNAJC19P7-201ENST00000428811 344 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 EZH2P1-201ENST00000431167 291 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AL591704.1-201ENST00000432574 275 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AL354761.1-201ENST00000434190 526 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 PPIAP10-201ENST00000438675 458 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RPL21P103-201ENST00000479921 488 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RN7SL236P-201ENST00000484759 284 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 RN7SL388P-201ENST00000498736 339 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 HMGB1P21-201ENST00000502313 581 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 COX7A2P2-201ENST00000505291 250 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AC092436.3-201ENST00000511788 257 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 SNORA25.14-201ENST00000516481 132 ntBASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
KRTAP3-1Q9BYR8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms