Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CHGAP10645 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
CHGAP10645 WDR95P-201ENST00000425638 1542 ntBASIC9.31□□□□□ -0.92
CHGAP10645 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC9.3□□□□□ -0.92
CHGAP10645 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CHGAP10645 RPL5P5-201ENST00000392009 893 ntBASIC9.3□□□□□ -0.92
CHGAP10645 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 RNU4ATAC2P-201ENST00000408674 126 ntBASIC9.3□□□□□ -0.92
CHGAP10645 RBM6-203ENST00000421682 684 ntTSL 2 BASIC9.3□□□□□ -0.92
CHGAP10645 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC9.3□□□□□ -0.92
CHGAP10645 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC9.3□□□□□ -0.92
CHGAP10645 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9.3□□□□□ -0.92
CHGAP10645 RPS24P8-201ENST00000431490 402 ntBASIC9.3□□□□□ -0.92
CHGAP10645 AC016691.1-201ENST00000441321 413 ntBASIC9.3□□□□□ -0.92
CHGAP10645 AC097463.1-201ENST00000447288 481 ntBASIC9.3□□□□□ -0.92
CHGAP10645 AC006480.1-201ENST00000449887 378 ntBASIC9.3□□□□□ -0.92
CHGAP10645 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC9.3□□□□□ -0.92
CHGAP10645 LSM3P4-201ENST00000502948 309 ntBASIC9.3□□□□□ -0.92
CHGAP10645 AC025458.1-201ENST00000506046 166 ntBASIC9.3□□□□□ -0.92
CHGAP10645 RNA5SP401-201ENST00000515920 127 ntBASIC9.3□□□□□ -0.92
CHGAP10645 SNORA40.12-201ENST00000516329 111 ntBASIC9.3□□□□□ -0.92
CHGAP10645 RN7SKP238-201ENST00000516483 249 ntBASIC9.3□□□□□ -0.92
CHGAP10645 SNORD60.2-201ENST00000516883 86 ntBASIC9.3□□□□□ -0.92
CHGAP10645 AF279873.1-201ENST00000523393 313 ntBASIC9.3□□□□□ -0.92
CHGAP10645 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 AC018690.1-201ENST00000608144 626 ntBASIC9.3□□□□□ -0.92
CHGAP10645 FAM27E2-201ENST00000619668 403 ntBASIC9.3□□□□□ -0.92
CHGAP10645 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9.3□□□□□ -0.92
CHGAP10645 NPL-212ENST00000614468 2376 ntTSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC9.3□□□□□ -0.92
CHGAP10645 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CHGAP10645 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 AP002907.1-201ENST00000606361 1430 ntBASIC9.3□□□□□ -0.92
CHGAP10645 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.3□□□□□ -0.92
CHGAP10645 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC9.29□□□□□ -0.92
CHGAP10645 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CHGAP10645 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
CHGAP10645 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
CHGAP10645 OR5J1P-201ENST00000313544 939 ntBASIC9.29□□□□□ -0.92
CHGAP10645 RNU6-657P-201ENST00000383904 107 ntBASIC9.29□□□□□ -0.92
CHGAP10645 NPM1P38-201ENST00000403835 865 ntBASIC9.29□□□□□ -0.92
CHGAP10645 RN7SKP206-201ENST00000410823 293 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AC009161.1-201ENST00000417306 376 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC9.29□□□□□ -0.92
CHGAP10645 PPIAP7-201ENST00000454070 489 ntBASIC9.29□□□□□ -0.92
CHGAP10645 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC9.29□□□□□ -0.92
CHGAP10645 RPL23AP12-201ENST00000467573 473 ntBASIC9.29□□□□□ -0.92
CHGAP10645 RPL23AP64-201ENST00000469465 435 ntBASIC9.29□□□□□ -0.92
CHGAP10645 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC9.29□□□□□ -0.92
CHGAP10645 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC9.29□□□□□ -0.92
CHGAP10645 RPSAP51-201ENST00000497462 645 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC9.29□□□□□ -0.92
CHGAP10645 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC9.29□□□□□ -0.92
CHGAP10645 AP000620.1-201ENST00000527147 504 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC9.29□□□□□ -0.92
CHGAP10645 AC023050.3-201ENST00000541142 333 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC9.29□□□□□ -0.92
CHGAP10645 AL121579.2-201ENST00000555466 590 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC9.29□□□□□ -0.92
CHGAP10645 AC068831.8-201ENST00000620171 435 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AL356585.4-201ENST00000623078 1229 ntBASIC9.29□□□□□ -0.92
CHGAP10645 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
CHGAP10645 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC9.29□□□□□ -0.92
CHGAP10645 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC9.29□□□□□ -0.92
CHGAP10645 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CHGAP10645 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CHGAP10645 MFSD4BP1-201ENST00000513330 1552 ntBASIC9.29□□□□□ -0.92
CHGAP10645 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
CHGAP10645 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
CHGAP10645 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHGAP10645 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHGAP10645 AL139384.2-201ENST00000613809 3590 ntBASIC9.28□□□□□ -0.92
CHGAP10645 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHGAP10645 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHGAP10645 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHGAP10645 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
CHGAP10645 Y_RNA.46-201ENST00000362695 102 ntBASIC9.28□□□□□ -0.92
CHGAP10645 RNU6-223P-201ENST00000362830 107 ntBASIC9.28□□□□□ -0.92
CHGAP10645 MTND3P8-201ENST00000412909 339 ntBASIC9.28□□□□□ -0.92
CHGAP10645 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC9.28□□□□□ -0.92
CHGAP10645 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHGAP10645 GPM6BP2-201ENST00000432046 144 ntBASIC9.28□□□□□ -0.92
CHGAP10645 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms