Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC069499.1-201ENST00000489433 509 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC8.54□□□□□ -1.04
CD44P16070 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 RN7SKP14-201ENST00000516000 329 ntBASIC8.54□□□□□ -1.04
CD44P16070 SNORD116-28-201ENST00000516123 91 ntBASIC8.54□□□□□ -1.04
CD44P16070 IGHVII-22-1-201ENST00000517888 265 ntBASIC8.54□□□□□ -1.04
CD44P16070 IGHVII-53-1-201ENST00000519538 255 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC8.54□□□□□ -1.04
CD44P16070 CYCSP26-201ENST00000534107 320 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.54□□□□□ -1.04
CD44P16070 AL353997.4-201ENST00000586196 166 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC063977.7-201ENST00000594454 337 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC007619.2-201ENST00000605743 379 ntBASIC8.54□□□□□ -1.04
CD44P16070 U2.17-201ENST00000611454 95 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CD44P16070 AC025034.2-201ENST00000623264 286 ntBASIC8.54□□□□□ -1.04
CD44P16070 AC099667.1-201ENST00000624222 469 ntBASIC8.54□□□□□ -1.04
CD44P16070 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.54□□□□□ -1.04
CD44P16070 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 OR8B9P-202ENST00000642028 5216 ntBASIC8.54□□□□□ -1.04
CD44P16070 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CD44P16070 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
CD44P16070 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.53□□□□□ -1.04
CD44P16070 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 RNU1-47P-201ENST00000362966 163 ntBASIC8.53□□□□□ -1.04
CD44P16070 RNU12-2P-201ENST00000364789 156 ntBASIC8.53□□□□□ -1.04
CD44P16070 RPL36AP36-201ENST00000418616 301 ntBASIC8.53□□□□□ -1.04
CD44P16070 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC8.53□□□□□ -1.04
CD44P16070 AC006457.1-201ENST00000420733 392 ntBASIC8.53□□□□□ -1.04
CD44P16070 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CD44P16070 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.53□□□□□ -1.04
CD44P16070 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.53□□□□□ -1.04
CD44P16070 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.53□□□□□ -1.04
CD44P16070 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC8.53□□□□□ -1.04
CD44P16070 AC108120.1-201ENST00000506543 991 ntBASIC8.53□□□□□ -1.04
CD44P16070 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC8.53□□□□□ -1.04
CD44P16070 RNU6-1219P-201ENST00000516143 112 ntBASIC8.53□□□□□ -1.04
CD44P16070 RNU6-426P-201ENST00000516464 97 ntBASIC8.53□□□□□ -1.04
CD44P16070 AC109479.2-201ENST00000517842 174 ntBASIC8.53□□□□□ -1.04
CD44P16070 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC8.53□□□□□ -1.04
CD44P16070 RNU6-323P-201ENST00000521915 107 ntBASIC8.53□□□□□ -1.04
CD44P16070 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.53□□□□□ -1.04
CD44P16070 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.53□□□□□ -1.04
CD44P16070 AC026111.1-201ENST00000551090 1195 ntBASIC8.53□□□□□ -1.04
CD44P16070 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.53□□□□□ -1.04
CD44P16070 AC009852.2-201ENST00000567898 485 ntBASIC8.53□□□□□ -1.04
CD44P16070 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC8.53□□□□□ -1.04
CD44P16070 MIR548Y-201ENST00000582739 110 ntBASIC8.53□□□□□ -1.04
CD44P16070 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.53□□□□□ -1.04
CD44P16070 AL008718.3-201ENST00000610217 321 ntBASIC8.53□□□□□ -1.04
CD44P16070 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.53□□□□□ -1.04
CD44P16070 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC8.53□□□□□ -1.04
CD44P16070 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CD44P16070 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.53□□□□□ -1.04
CD44P16070 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.53□□□□□ -1.04
CD44P16070 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CD44P16070 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CD44P16070 AC110774.1-201ENST00000623567 2018 ntBASIC8.53□□□□□ -1.04
CD44P16070 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CD44P16070 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
CD44P16070 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CD44P16070 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.52□□□□□ -1.04
CD44P16070 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 SAMMSON-222ENST00000641901 2727 ntBASIC8.52□□□□□ -1.05
CD44P16070 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 RNA5SP389-201ENST00000362610 115 ntBASIC8.52□□□□□ -1.05
CD44P16070 RNA5SP226-201ENST00000362653 115 ntBASIC8.52□□□□□ -1.05
CD44P16070 RNA5SP161-201ENST00000363871 115 ntBASIC8.52□□□□□ -1.05
CD44P16070 RNU6-595P-201ENST00000363944 107 ntBASIC8.52□□□□□ -1.05
CD44P16070 SNORD46-201ENST00000364043 104 ntBASIC8.52□□□□□ -1.05
CD44P16070 RNA5SP149-201ENST00000364952 92 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms