RNA–Protein interactions for RNA: ENST00000422143.2

TRBV29-1-201, Transcript of T cell receptor beta variable 29-1, humanhuman

APPRIS P1 BASIC

Gene TRBV29-1, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29-1-201ENST00000422143 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
TRBV29-1-201ENST00000422143 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
TRBV29-1-201ENST00000422143 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
TRBV29-1-201ENST00000422143 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
TRBV29-1-201ENST00000422143 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
TRBV29-1-201ENST00000422143 FOXD1Q16676 465 aa12.81□□□□□ -0.36
TRBV29-1-201ENST00000422143 ADRA2BP18089 450 aa12.61□□□□□ -0.39
TRBV29-1-201ENST00000422143 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
TRBV29-1-201ENST00000422143 NISCHQ9Y2I1 1504 aa12.5□□□□□ -0.41
TRBV29-1-201ENST00000422143 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
TRBV29-1-201ENST00000422143 KCNA4P22459 653 aa12.04□□□□□ -0.48
TRBV29-1-201ENST00000422143 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
TRBV29-1-201ENST00000422143 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
TRBV29-1-201ENST00000422143 MSH5O43196 834 aa11.75□□□□□ -0.53
TRBV29-1-201ENST00000422143 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
TRBV29-1-201ENST00000422143 EHMT2Q96KQ7 1210 aa11.6□□□□□ -0.55
TRBV29-1-201ENST00000422143 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
TRBV29-1-201ENST00000422143 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
TRBV29-1-201ENST00000422143 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
TRBV29-1-201ENST00000422143 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
TRBV29-1-201ENST00000422143 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
TRBV29-1-201ENST00000422143 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
TRBV29-1-201ENST00000422143 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
TRBV29-1-201ENST00000422143 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
TRBV29-1-201ENST00000422143 HOXD11P31277 338 aaPredicted RBP11.1□□□□□ -0.63
TRBV29-1-201ENST00000422143 ZBTB22O15209 634 aa11.06□□□□□ -0.64
TRBV29-1-201ENST00000422143 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
TRBV29-1-201ENST00000422143 CCDC180Q9P1Z9 1646 aa10.95□□□□□ -0.66
TRBV29-1-201ENST00000422143 ABCC9O60706 1549 aa10.82□□□□□ -0.68
TRBV29-1-201ENST00000422143 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
TRBV29-1-201ENST00000422143 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.69
TRBV29-1-201ENST00000422143 ATXN8OSP0DMR3 200 aa10.69□□□□□ -0.7
TRBV29-1-201ENST00000422143 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
TRBV29-1-201ENST00000422143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRBV29-1-201ENST00000422143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
TRBV29-1-201ENST00000422143 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
TRBV29-1-201ENST00000422143 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
TRBV29-1-201ENST00000422143 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
TRBV29-1-201ENST00000422143 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
TRBV29-1-201ENST00000422143 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
TRBV29-1-201ENST00000422143 NACADO15069 1562 aa10.35□□□□□ -0.75
TRBV29-1-201ENST00000422143 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
TRBV29-1-201ENST00000422143 RB1CC1Q8TDY2 1594 aa10.32□□□□□ -0.76
TRBV29-1-201ENST00000422143 APLP2Q06481 763 aa10.32□□□□□ -0.76
TRBV29-1-201ENST00000422143 DCAF1Q9Y4B6 1507 aa10.31□□□□□ -0.76
TRBV29-1-201ENST00000422143 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
TRBV29-1-201ENST00000422143 FKBP8Q14318 412 aa10.22□□□□□ -0.77
TRBV29-1-201ENST00000422143 PABPN1Q86U42 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRBV29-1-201ENST00000422143 ZNF219Q9P2Y4 722 aaPredicted RBP10.17□□□□□ -0.78
TRBV29-1-201ENST00000422143 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
TRBV29-1-201ENST00000422143 SCRIBQ14160 1630 aa10.08□□□□□ -0.8
TRBV29-1-201ENST00000422143 RNF39Q9H2S5 420 aa10.07□□□□□ -0.8
TRBV29-1-201ENST00000422143 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
TRBV29-1-201ENST00000422143 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
TRBV29-1-201ENST00000422143 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
TRBV29-1-201ENST00000422143 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
TRBV29-1-201ENST00000422143 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
TRBV29-1-201ENST00000422143 POTEDQ86YR6 584 aa9.96□□□□□ -0.82
TRBV29-1-201ENST00000422143 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
TRBV29-1-201ENST00000422143 FBLN2P98095 1184 aa9.94□□□□□ -0.82
TRBV29-1-201ENST00000422143 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
TRBV29-1-201ENST00000422143 CAPN15O75808 1086 aa9.93□□□□□ -0.82
TRBV29-1-201ENST00000422143 POLA2Q14181 598 aa9.91□□□□□ -0.82
TRBV29-1-201ENST00000422143 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
TRBV29-1-201ENST00000422143 SPDYE4A6NLX3 237 aa9.89□□□□□ -0.83
TRBV29-1-201ENST00000422143 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
TRBV29-1-201ENST00000422143 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
TRBV29-1-201ENST00000422143 PROM2Q8N271 834 aa9.82□□□□□ -0.84
TRBV29-1-201ENST00000422143 CECR2Q9BXF3 1484 aa9.8□□□□□ -0.84
TRBV29-1-201ENST00000422143 EIF4G1Q04637 1599 aaKnown RBP9.79□□□□□ -0.84
TRBV29-1-201ENST00000422143 CC2D2AQ9P2K1 1620 aa9.73□□□□□ -0.85
TRBV29-1-201ENST00000422143 ABCB7O75027 752 aa9.72□□□□□ -0.85
TRBV29-1-201ENST00000422143 DSG3P32926 999 aa9.69□□□□□ -0.86
TRBV29-1-201ENST00000422143 MROH2BQ7Z745 1585 aa9.67□□□□□ -0.86
TRBV29-1-201ENST00000422143 VASPP50552 380 aaPredicted RBP9.65□□□□□ -0.86
TRBV29-1-201ENST00000422143 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
TRBV29-1-201ENST00000422143 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
TRBV29-1-201ENST00000422143 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
TRBV29-1-201ENST00000422143 BAZ1AQ9NRL2 1556 aaPredicted RBP9.63□□□□□ -0.87
TRBV29-1-201ENST00000422143 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
TRBV29-1-201ENST00000422143 RSF1Q96T23 1441 aaPredicted RBP9.61□□□□□ -0.87
TRBV29-1-201ENST00000422143 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
TRBV29-1-201ENST00000422143 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
TRBV29-1-201ENST00000422143 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
TRBV29-1-201ENST00000422143 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
TRBV29-1-201ENST00000422143 PEG3Q9GZU2 1588 aa9.55□□□□□ -0.88
TRBV29-1-201ENST00000422143 SSUH2Q9Y2M2 353 aa9.55□□□□□ -0.88
TRBV29-1-201ENST00000422143 SMARCA2P51531 1590 aa9.54□□□□□ -0.88
TRBV29-1-201ENST00000422143 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
TRBV29-1-201ENST00000422143 OSCARQ8IYS5 282 aa9.53□□□□□ -0.88
TRBV29-1-201ENST00000422143 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
TRBV29-1-201ENST00000422143 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
TRBV29-1-201ENST00000422143 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
TRBV29-1-201ENST00000422143 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
TRBV29-1-201ENST00000422143 WIZO95785 1651 aa9.5□□□□□ -0.89
TRBV29-1-201ENST00000422143 SUPT5HO00267 1087 aaKnown RBP9.42□□□□□ -0.9
TRBV29-1-201ENST00000422143 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
TRBV29-1-201ENST00000422143 NESP48681 1621 aa9.4□□□□□ -0.9
TRBV29-1-201ENST00000422143 TOP2AP11388 1531 aaKnown RBP9.4□□□□□ -0.91
TRBV29-1-201ENST00000422143 KLHL34Q8N239 644 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms