RNA–Protein interactions for RNA: ENST00000516143.1

RNU6-1219P-201, Transcript of RNA, U6 small nuclear 1219, pseudogene, humanhuman

BASIC

Gene RNU6-1219P, Length 112 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1219P-201ENST00000516143 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
RNU6-1219P-201ENST00000516143 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
RNU6-1219P-201ENST00000516143 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
RNU6-1219P-201ENST00000516143 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
RNU6-1219P-201ENST00000516143 FOXD1Q16676 465 aa13.29□□□□□ -0.28
RNU6-1219P-201ENST00000516143 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
RNU6-1219P-201ENST00000516143 MSH5O43196 834 aa12.61□□□□□ -0.39
RNU6-1219P-201ENST00000516143 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
RNU6-1219P-201ENST00000516143 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
RNU6-1219P-201ENST00000516143 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
RNU6-1219P-201ENST00000516143 ADRA2BP18089 450 aa12.16□□□□□ -0.46
RNU6-1219P-201ENST00000516143 DMRT2Q9Y5R5 561 aa11.26□□□□□ -0.61
RNU6-1219P-201ENST00000516143 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
RNU6-1219P-201ENST00000516143 SCAF1Q9H7N4 1312 aaKnown RBP11.22□□□□□ -0.61
RNU6-1219P-201ENST00000516143 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
RNU6-1219P-201ENST00000516143 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
RNU6-1219P-201ENST00000516143 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
RNU6-1219P-201ENST00000516143 HOXD11P31277 338 aaPredicted RBP10.73□□□□□ -0.69
RNU6-1219P-201ENST00000516143 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
RNU6-1219P-201ENST00000516143 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
RNU6-1219P-201ENST00000516143 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
RNU6-1219P-201ENST00000516143 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
RNU6-1219P-201ENST00000516143 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
RNU6-1219P-201ENST00000516143 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
RNU6-1219P-201ENST00000516143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.28□□□□□ -0.76
RNU6-1219P-201ENST00000516143 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
RNU6-1219P-201ENST00000516143 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
RNU6-1219P-201ENST00000516143 CAPN15O75808 1086 aa9.96□□□□□ -0.82
RNU6-1219P-201ENST00000516143 POTEHQ6S545 545 aa9.94□□□□□ -0.82
RNU6-1219P-201ENST00000516143 DSG3P32926 999 aa9.92□□□□□ -0.82
RNU6-1219P-201ENST00000516143 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
RNU6-1219P-201ENST00000516143 APLP2Q06481 763 aa9.79□□□□□ -0.84
RNU6-1219P-201ENST00000516143 TRHP20396 242 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1219P-201ENST00000516143 ZNF219Q9P2Y4 722 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1219P-201ENST00000516143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.68□□□□□ -0.86
RNU6-1219P-201ENST00000516143 HNRNPUL2Q1KMD3 747 aaKnown RBP9.68□□□□□ -0.86
RNU6-1219P-201ENST00000516143 ABCB7O75027 752 aa9.67□□□□□ -0.86
RNU6-1219P-201ENST00000516143 SLC4A2P04920 1241 aa9.67□□□□□ -0.86
RNU6-1219P-201ENST00000516143 KCNA4P22459 653 aa9.64□□□□□ -0.87
RNU6-1219P-201ENST00000516143 SAMD1Q6SPF0 538 aaPredicted RBP9.59□□□□□ -0.87
RNU6-1219P-201ENST00000516143 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
RNU6-1219P-201ENST00000516143 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
RNU6-1219P-201ENST00000516143 MYCNP04198 464 aaPredicted RBP9.39□□□□□ -0.91
RNU6-1219P-201ENST00000516143 POLA2Q14181 598 aa9.37□□□□□ -0.91
RNU6-1219P-201ENST00000516143 AKT1S1Q96B36 256 aa9.24□□□□□ -0.93
RNU6-1219P-201ENST00000516143 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
RNU6-1219P-201ENST00000516143 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
RNU6-1219P-201ENST00000516143 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
RNU6-1219P-201ENST00000516143 FOXD4L1Q9NU39 408 aa9.12□□□□□ -0.95
RNU6-1219P-201ENST00000516143 PIP4P2Q8N4L2 257 aa9.1□□□□□ -0.95
RNU6-1219P-201ENST00000516143 ATF5Q9Y2D1 282 aaPredicted RBP9.1□□□□□ -0.95
RNU6-1219P-201ENST00000516143 OSCARQ8IYS5 282 aa9.09□□□□□ -0.95
RNU6-1219P-201ENST00000516143 SLC4A1APQ9BWU0 796 aaKnown RBP9.09□□□□□ -0.95
RNU6-1219P-201ENST00000516143 HAX1O00165 279 aa9.05□□□□□ -0.96
RNU6-1219P-201ENST00000516143 PITPNM1O00562 1244 aa9.03□□□□□ -0.96
RNU6-1219P-201ENST00000516143 FXR2P51116 673 aaKnown RBP eCLIP8.99□□□□□ -0.97
RNU6-1219P-201ENST00000516143 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.98
RNU6-1219P-201ENST00000516143 SPDYE6P0CI01 402 aa8.9□□□□□ -0.98
RNU6-1219P-201ENST00000516143 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
RNU6-1219P-201ENST00000516143 ATXN8OSP0DMR3 200 aa8.89□□□□□ -0.99
RNU6-1219P-201ENST00000516143 FBLN2P98095 1184 aa8.88□□□□□ -0.99
RNU6-1219P-201ENST00000516143 ZBTB22O15209 634 aa8.82□□□□□ -1
RNU6-1219P-201ENST00000516143 EVX2Q03828 476 aa8.82□□□□□ -1
RNU6-1219P-201ENST00000516143 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
RNU6-1219P-201ENST00000516143 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
RNU6-1219P-201ENST00000516143 CLEC11AQ9Y240 323 aa8.8□□□□□ -1
RNU6-1219P-201ENST00000516143 ZNF692Q9BU19 519 aaPredicted RBP8.74□□□□□ -1.01
RNU6-1219P-201ENST00000516143 C19orf67A6NJJ6 358 aa8.73□□□□□ -1.01
RNU6-1219P-201ENST00000516143 SSUH2Q9Y2M2 353 aa8.71□□□□□ -1.02
RNU6-1219P-201ENST00000516143 MKRN4PQ13434 485 aaPredicted RBP8.68□□□□□ -1.02
RNU6-1219P-201ENST00000516143 GABBR2O75899 941 aa8.66□□□□□ -1.02
RNU6-1219P-201ENST00000516143 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
RNU6-1219P-201ENST00000516143 PRR29P0C7W0 189 aa8.62□□□□□ -1.03
RNU6-1219P-201ENST00000516143 LHX8Q68G74 356 aa8.62□□□□□ -1.03
RNU6-1219P-201ENST00000516143 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
RNU6-1219P-201ENST00000516143 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
RNU6-1219P-201ENST00000516143 CLCN6P51797 869 aa8.5□□□□□ -1.05
RNU6-1219P-201ENST00000516143 FARP1Q9Y4F1 1045 aaPredicted RBP8.49□□□□□ -1.05
RNU6-1219P-201ENST00000516143 POTEIP0CG38 1075 aa8.44□□□□□ -1.06
RNU6-1219P-201ENST00000516143 DCBLD2Q96PD2 775 aa8.42□□□□□ -1.06
RNU6-1219P-201ENST00000516143 ZNF579Q8NAF0 562 aaKnown RBP8.37□□□□□ -1.07
RNU6-1219P-201ENST00000516143 ZRANB1Q9UGI0 708 aa8.35□□□□□ -1.07
RNU6-1219P-201ENST00000516143 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
RNU6-1219P-201ENST00000516143 PLSCR2Q9NRY7 297 aa8.32□□□□□ -1.08
RNU6-1219P-201ENST00000516143 CREBZFQ9NS37 354 aa8.3□□□□□ -1.08
RNU6-1219P-201ENST00000516143 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
RNU6-1219P-201ENST00000516143 GALR2O43603 387 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1219P-201ENST00000516143 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU6-1219P-201ENST00000516143 OTUD5Q96G74 571 aa8.2□□□□□ -1.1
RNU6-1219P-201ENST00000516143 PHF12Q96QT6 1004 aa8.2□□□□□ -1.1
RNU6-1219P-201ENST00000516143 SPDYE4A6NLX3 237 aa8.19□□□□□ -1.1
RNU6-1219P-201ENST00000516143 CSRNP3Q8WYN3 585 aa8.18□□□□□ -1.1
RNU6-1219P-201ENST00000516143 POTEB2H3BUK9 544 aa8.14□□□□□ -1.11
RNU6-1219P-201ENST00000516143 POTEMA6NI47 508 aa8.13□□□□□ -1.11
RNU6-1219P-201ENST00000516143 POTEGQ6S5H5 508 aa8.11□□□□□ -1.11
RNU6-1219P-201ENST00000516143 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
RNU6-1219P-201ENST00000516143 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
RNU6-1219P-201ENST00000516143 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
RNU6-1219P-201ENST00000516143 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
RNU6-1219P-201ENST00000516143 C7P10643 843 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms