Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SL213P-201ENST00000463482 317 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 RN7SL815P-201ENST00000470970 290 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC104109.1-201ENST00000498563 436 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 FTH1P21-201ENST00000512179 511 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 RNA5SP287-201ENST00000516358 103 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 Y_RNA.680-201ENST00000516441 93 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 SNORD116.3-201ENST00000517176 78 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC135001.1-201ENST00000544546 283 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 LSM6P2-201ENST00000552208 177 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC027796.1-201ENST00000575593 512 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 MIR3137-201ENST00000577367 75 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC245517.5-201ENST00000611529 162 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 MIR6726-201ENST00000613751 61 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 MIR6736-201ENST00000616799 59 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC011155.2-201ENST00000623202 216 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC145138.1-201ENST00000512908 2851 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 TRIM51HP-202ENST00000530412 1823 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC022819.1-201ENST00000563495 3910 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 RNA5SP463-201ENST00000363030 120 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 Y_RNA.350-201ENST00000365409 98 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 RHOT1P2-201ENST00000366423 333 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 RNU6-823P-201ENST00000391042 103 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL031985.1-201ENST00000392713 418 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 COX6A1P3-201ENST00000404167 293 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 RNU2-36P-201ENST00000410361 191 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 YWHAZP3-201ENST00000415292 738 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 SDAD1P3-201ENST00000427380 333 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC079807.1-201ENST00000429993 481 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC000362.1-201ENST00000433725 425 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL512882.1-201ENST00000436086 832 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 SLC25A15P5-201ENST00000508033 253 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 ENPP7P3-201ENST00000509123 241 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 RNU7-51P-201ENST00000516560 62 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 Y_RNA.708-201ENST00000516950 96 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.85□□□□□ -1.31
USB1Q9BQ65 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USB1Q9BQ65 OR4P1P-201ENST00000530808 1136 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 OR7E1P-201ENST00000533891 958 ntBASIC6.85□□□□□ -1.31
USB1Q9BQ65 AP003174.3-201ENST00000537926 516 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms