RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
LSM6P2-201ENST00000552208 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
LSM6P2-201ENST00000552208 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
LSM6P2-201ENST00000552208 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
LSM6P2-201ENST00000552208 PHF23Q9BUL5 403 aaPredicted RBP14.04□□□□□ -0.16
LSM6P2-201ENST00000552208 FOXD1Q16676 465 aa13.47□□□□□ -0.25
LSM6P2-201ENST00000552208 MSH5O43196 834 aa12.95□□□□□ -0.34
LSM6P2-201ENST00000552208 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
LSM6P2-201ENST00000552208 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
LSM6P2-201ENST00000552208 ADRA2BP18089 450 aa11.97□□□□□ -0.49
LSM6P2-201ENST00000552208 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
LSM6P2-201ENST00000552208 KCNA4P22459 653 aa11.74□□□□□ -0.53
LSM6P2-201ENST00000552208 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
LSM6P2-201ENST00000552208 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
LSM6P2-201ENST00000552208 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
LSM6P2-201ENST00000552208 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
LSM6P2-201ENST00000552208 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
LSM6P2-201ENST00000552208 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
LSM6P2-201ENST00000552208 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
LSM6P2-201ENST00000552208 NCBP3Q53F19 620 aaKnown RBP11.14□□□□□ -0.63
LSM6P2-201ENST00000552208 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
LSM6P2-201ENST00000552208 SCAF1Q9H7N4 1312 aaKnown RBP11□□□□□ -0.65
LSM6P2-201ENST00000552208 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
LSM6P2-201ENST00000552208 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
LSM6P2-201ENST00000552208 ZBTB22O15209 634 aa10.85□□□□□ -0.67
LSM6P2-201ENST00000552208 POTEHQ6S545 545 aa10.84□□□□□ -0.67
LSM6P2-201ENST00000552208 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
LSM6P2-201ENST00000552208 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
LSM6P2-201ENST00000552208 DNAJC5BQ9UF47 199 aa10.74□□□□□ -0.69
LSM6P2-201ENST00000552208 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
LSM6P2-201ENST00000552208 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
LSM6P2-201ENST00000552208 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
LSM6P2-201ENST00000552208 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
LSM6P2-201ENST00000552208 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
LSM6P2-201ENST00000552208 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.77
LSM6P2-201ENST00000552208 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
LSM6P2-201ENST00000552208 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
LSM6P2-201ENST00000552208 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
LSM6P2-201ENST00000552208 FKBP8Q14318 412 aa10.05□□□□□ -0.8
LSM6P2-201ENST00000552208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10□□□□□ -0.81
LSM6P2-201ENST00000552208 DSG3P32926 999 aa9.98□□□□□ -0.81
LSM6P2-201ENST00000552208 ATF5Q9Y2D1 282 aaPredicted RBP9.9□□□□□ -0.82
LSM6P2-201ENST00000552208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.88□□□□□ -0.83
LSM6P2-201ENST00000552208 HNRNPUL2Q1KMD3 747 aaKnown RBP9.88□□□□□ -0.83
LSM6P2-201ENST00000552208 CAPN15O75808 1086 aa9.82□□□□□ -0.84
LSM6P2-201ENST00000552208 SAMD1Q6SPF0 538 aaPredicted RBP9.82□□□□□ -0.84
LSM6P2-201ENST00000552208 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
LSM6P2-201ENST00000552208 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
LSM6P2-201ENST00000552208 U3KPZ7 1027 aaPredicted RBP9.77□□□□□ -0.85
LSM6P2-201ENST00000552208 APLP2Q06481 763 aa9.74□□□□□ -0.85
LSM6P2-201ENST00000552208 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
LSM6P2-201ENST00000552208 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
LSM6P2-201ENST00000552208 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
LSM6P2-201ENST00000552208 PROM2Q8N271 834 aa9.54□□□□□ -0.88
LSM6P2-201ENST00000552208 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
LSM6P2-201ENST00000552208 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
LSM6P2-201ENST00000552208 ABCB7O75027 752 aa9.51□□□□□ -0.89
LSM6P2-201ENST00000552208 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
LSM6P2-201ENST00000552208 TRHP20396 242 aaPredicted RBP9.46□□□□□ -0.9
LSM6P2-201ENST00000552208 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
LSM6P2-201ENST00000552208 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
LSM6P2-201ENST00000552208 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
LSM6P2-201ENST00000552208 FBLN2P98095 1184 aa9.34□□□□□ -0.91
LSM6P2-201ENST00000552208 HAX1O00165 279 aa9.31□□□□□ -0.92
LSM6P2-201ENST00000552208 ZBTB12Q9Y330 459 aaPredicted RBP9.3□□□□□ -0.92
LSM6P2-201ENST00000552208 PKD2Q13563 968 aa9.29□□□□□ -0.92
LSM6P2-201ENST00000552208 POLA2Q14181 598 aa9.29□□□□□ -0.92
LSM6P2-201ENST00000552208 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
LSM6P2-201ENST00000552208 PLSCR2Q9NRY7 297 aa9.25□□□□□ -0.93
LSM6P2-201ENST00000552208 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
LSM6P2-201ENST00000552208 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
LSM6P2-201ENST00000552208 DCAF8L2P0C7V8 631 aa9.15□□□□□ -0.94
LSM6P2-201ENST00000552208 LHX8Q68G74 356 aa9.15□□□□□ -0.94
LSM6P2-201ENST00000552208 VSIG10Q8N0Z9 540 aa9.15□□□□□ -0.94
LSM6P2-201ENST00000552208 EVX2Q03828 476 aa9.12□□□□□ -0.95
LSM6P2-201ENST00000552208 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
LSM6P2-201ENST00000552208 BCANQ96GW7 911 aa9.1□□□□□ -0.95
LSM6P2-201ENST00000552208 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
LSM6P2-201ENST00000552208 FXR2P51116 673 aaKnown RBP eCLIP9.08□□□□□ -0.96
LSM6P2-201ENST00000552208 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
LSM6P2-201ENST00000552208 REM2Q8IYK8 340 aaPredicted RBP9.06□□□□□ -0.96
LSM6P2-201ENST00000552208 STAG3Q9UJ98 1225 aa9.05□□□□□ -0.96
LSM6P2-201ENST00000552208 KDM2AQ9Y2K7 1162 aa9.05□□□□□ -0.96
LSM6P2-201ENST00000552208 ECM2O94769 699 aaPredicted RBP9.04□□□□□ -0.96
LSM6P2-201ENST00000552208 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
LSM6P2-201ENST00000552208 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
LSM6P2-201ENST00000552208 SPDYE2BA6NHP3 402 aa9.02□□□□□ -0.97
LSM6P2-201ENST00000552208 SPDYE6P0CI01 402 aa9.02□□□□□ -0.97
LSM6P2-201ENST00000552208 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
LSM6P2-201ENST00000552208 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
LSM6P2-201ENST00000552208 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.02□□□□□ -0.97
LSM6P2-201ENST00000552208 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
LSM6P2-201ENST00000552208 ZNF692Q9BU19 519 aaPredicted RBP9.01□□□□□ -0.97
LSM6P2-201ENST00000552208 RGL2O15211 777 aa8.99□□□□□ -0.97
LSM6P2-201ENST00000552208 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
LSM6P2-201ENST00000552208 PITPNM1O00562 1244 aa8.96□□□□□ -0.98
LSM6P2-201ENST00000552208 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
LSM6P2-201ENST00000552208 OSCARQ8IYS5 282 aa8.94□□□□□ -0.98
LSM6P2-201ENST00000552208 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
LSM6P2-201ENST00000552208 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms