Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 AL691432.2-201ENST00000607222 2038 ntBASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 OR7E47P-201ENST00000546390 1422 ntBASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 AC134043.2-201ENST00000624206 2238 ntBASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 AC079089.2-201ENST00000531211 1277 ntBASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01558Q9Y6Z2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 ZNRF2P1-201ENST00000441407 443 ntBASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01558Q9Y6Z2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms