Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COX11Q9Y6N1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
COX11Q9Y6N1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.21□□□□□ -0.14
COX11Q9Y6N1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 AC120498.10-201ENST00000621827 505 ntBASIC14.2□□□□□ -0.14
COX11Q9Y6N1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
COX11Q9Y6N1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COX11Q9Y6N1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms