Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 STARP1-201ENST00000397973 869 ntBASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 AL512408.1-201ENST00000569378 2000 ntBASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN10AQ9Y5Y9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 KRT18P48-201ENST00000434763 852 ntBASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 HYMAI.1-201ENST00000620949 238 ntBASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.34■■□□□ 1.01
SCN10AQ9Y5Y9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 HCG4P8-203ENST00000443049 980 ntBASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.33■■□□□ 1.01
SCN10AQ9Y5Y9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.33■■□□□ 1
SCN10AQ9Y5Y9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.33■■□□□ 1
SCN10AQ9Y5Y9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 IER3-202ENST00000376377 1350 ntBASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 AL121894.2-201ENST00000602977 491 ntBASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 AL031432.5-201ENST00000641059 760 ntBASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.32■■□□□ 1
SCN10AQ9Y5Y9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 AL162377.1-201ENST00000618844 1793 ntBASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 SPDYE15P-201ENST00000424157 909 ntBASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms