Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 NCF1B-203ENST00000435988 1254 ntBASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 TSPY6P-201ENST00000448518 926 ntBASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 MYC-209ENST00000641252 345 ntBASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 AC006333.2-201ENST00000607957 2099 ntBASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA3Q9Y5H8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 MIR4758-201ENST00000577688 71 ntBASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 HLA-B-256ENST00000639848 1089 ntBASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHA3Q9Y5H8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 AP006587.1-201ENST00000534129 1502 ntBASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 KRT8P8-201ENST00000434750 1448 ntBASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA3Q9Y5H8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 AC092368.3-202ENST00000574180 1591 ntBASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 SDHAP1-207ENST00000440850 2000 ntBASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 SLC29A4P1-201ENST00000398760 971 ntBASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 YBX1P10-201ENST00000444752 975 ntBASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 AL121906.2-201ENST00000621597 723 ntBASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHA3Q9Y5H8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCDHA3Q9Y5H8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA3Q9Y5H8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms