Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB6Q9Y5F9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 SNORA78-201ENST00000459373 127 ntBASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 AL049637.2-201ENST00000641778 930 ntBASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB6Q9Y5F9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGB6Q9Y5F9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 AC073912.3-201ENST00000624414 853 ntBASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB6Q9Y5F9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 AC099778.1-201ENST00000568593 1911 ntBASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 AL512408.1-201ENST00000569378 2000 ntBASIC18.32■□□□□ 0.52
PCDHGB6Q9Y5F9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGB6Q9Y5F9 HLA-G-202ENST00000376815 851 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms