Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 AC093525.10-201ENST00000625130 1569 ntBASIC18.36■□□□□ 0.53
AP4S1Q9Y587 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 AC068880.1-201ENST00000507289 2297 ntBASIC18.35■□□□□ 0.53
AP4S1Q9Y587 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 IRS3P-201ENST00000223076 1006 ntBASIC18.35■□□□□ 0.53
AP4S1Q9Y587 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 AC104187.1-201ENST00000607510 612 ntBASIC18.35■□□□□ 0.53
AP4S1Q9Y587 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.35■□□□□ 0.53
AP4S1Q9Y587 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4S1Q9Y587 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 PHGDH-210ENST00000641115 1638 ntBASIC18.34■□□□□ 0.53
AP4S1Q9Y587 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4S1Q9Y587 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 RASA4CP-201ENST00000424092 1398 ntBASIC18.33■□□□□ 0.53
AP4S1Q9Y587 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.33■□□□□ 0.53
AP4S1Q9Y587 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms