Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 C2orf69P3-201ENST00000565542 1120 ntBASIC20.91■□□□□ 0.94
USP15Q9Y4E8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.91■□□□□ 0.94
USP15Q9Y4E8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 AL358472.4-201ENST00000633140 710 ntBASIC20.9■□□□□ 0.94
USP15Q9Y4E8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP15Q9Y4E8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP15Q9Y4E8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
USP15Q9Y4E8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
USP15Q9Y4E8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 ECEL1P2-202ENST00000465689 757 ntBASIC20.89■□□□□ 0.93
USP15Q9Y4E8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP15Q9Y4E8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.88■□□□□ 0.93
USP15Q9Y4E8 AC091076.1-201ENST00000610741 619 ntBASIC20.88■□□□□ 0.93
USP15Q9Y4E8 AL031985.4-201ENST00000642138 673 ntBASIC20.88■□□□□ 0.93
USP15Q9Y4E8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 AC011484.1-201ENST00000377652 1995 ntBASIC20.88■□□□□ 0.93
USP15Q9Y4E8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP15Q9Y4E8 KRT8P36-201ENST00000489121 1440 ntBASIC20.87■□□□□ 0.93
USP15Q9Y4E8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 AC022616.7-201ENST00000525383 220 ntBASIC20.87■□□□□ 0.93
USP15Q9Y4E8 EGLN1P1-201ENST00000531623 762 ntBASIC20.87■□□□□ 0.93
USP15Q9Y4E8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP15Q9Y4E8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms