Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 KRT18P57-201ENST00000443599 1254 ntBASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 AC011506.1-201ENST00000474329 610 ntBASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 LINC01521-201ENST00000504184 1943 ntBASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.86■□□□□ 0.93
SSX2IPQ9Y2D8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 CRYGFP-201ENST00000418459 633 ntBASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 ATP5G1P1-201ENST00000448724 379 ntBASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 AC130371.2-201ENST00000619443 611 ntBASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX2IPQ9Y2D8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 AP000692.2-201ENST00000608391 879 ntBASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
SSX2IPQ9Y2D8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SSX2IPQ9Y2D8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.83■□□□□ 0.92
SSX2IPQ9Y2D8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.83■□□□□ 0.92
SSX2IPQ9Y2D8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.83■□□□□ 0.92
SSX2IPQ9Y2D8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSX2IPQ9Y2D8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SSX2IPQ9Y2D8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
SSX2IPQ9Y2D8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX2IPQ9Y2D8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms