Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP22Q9UPT9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP22Q9UPT9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP22Q9UPT9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP22Q9UPT9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP22Q9UPT9 FP475955.4-201ENST00000623131 1990 ntBASIC18.33■□□□□ 0.52
USP22Q9UPT9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.33■□□□□ 0.52
USP22Q9UPT9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP22Q9UPT9 AC010980.2-201ENST00000587099 1412 ntBASIC18.32■□□□□ 0.52
USP22Q9UPT9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 AC006015.1-201ENST00000429970 570 ntBASIC18.32■□□□□ 0.52
USP22Q9UPT9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 AC093787.1-201ENST00000450396 207 ntBASIC18.32■□□□□ 0.52
USP22Q9UPT9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
USP22Q9UPT9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP22Q9UPT9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 AC116351.2-201ENST00000606540 1585 ntBASIC18.31■□□□□ 0.52
USP22Q9UPT9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP22Q9UPT9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
USP22Q9UPT9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 WIZP1-201ENST00000531444 2299 ntBASIC18.3■□□□□ 0.52
USP22Q9UPT9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.3■□□□□ 0.52
USP22Q9UPT9 BID-214ENST00000617586 542 ntTSL 5 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP22Q9UPT9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.3■□□□□ 0.52
USP22Q9UPT9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms