Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 AL136162.1-201ENST00000607711 1078 ntBASIC17.32■□□□□ 0.36
SSR3Q9UNL2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 AL031598.1-201ENST00000561511 1773 ntBASIC17.32■□□□□ 0.36
SSR3Q9UNL2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 NOC2LP1-202ENST00000452600 2235 ntBASIC17.32■□□□□ 0.36
SSR3Q9UNL2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AC087633.2-202ENST00000565166 1439 ntBASIC17.31■□□□□ 0.36
SSR3Q9UNL2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AL354751.1-201ENST00000412768 1863 ntBASIC17.31■□□□□ 0.36
SSR3Q9UNL2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AC141586.3-201ENST00000562166 1838 ntBASIC17.31■□□□□ 0.36
SSR3Q9UNL2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 AL035685.1-201ENST00000636663 812 ntBASIC17.31■□□□□ 0.36
SSR3Q9UNL2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SSR3Q9UNL2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 RBM17P2-201ENST00000616397 1405 ntBASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 AP000997.3-201ENST00000623333 2250 ntBASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.3■□□□□ 0.36
SSR3Q9UNL2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 AL031963.3-201ENST00000606441 850 ntBASIC17.3■□□□□ 0.36
SSR3Q9UNL2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR3Q9UNL2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 AC135279.3-201ENST00000610945 1311 ntBASIC17.29■□□□□ 0.36
SSR3Q9UNL2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR3Q9UNL2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms