Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 AF186192.3-201ENST00000583427 947 ntBASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 LINC01465-201ENST00000408887 1940 ntBASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 AP002982.1-201ENST00000492365 877 ntBASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA4Q9UN74 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 AL445675.2-201ENST00000620291 557 ntBASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 AL135905.2-201ENST00000584934 1404 ntBASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA4Q9UN74 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHA4Q9UN74 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
PCDHA4Q9UN74 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
PCDHA4Q9UN74 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHA4Q9UN74 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.2■■□□□ 1.15
PCDHA4Q9UN74 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 RPS2P4-201ENST00000476944 856 ntBASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 AC116562.4-201ENST00000641316 2276 ntBASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 AC007952.6-201ENST00000573168 2673 ntBASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 AC003957.1-201ENST00000625108 2673 ntBASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHA4Q9UN74 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 RPS2P55-201ENST00000397318 883 ntBASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 AC107956.1-201ENST00000494359 873 ntBASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms