Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
TSR3Q9UJK0 AC087289.5-201ENST00000586076 3175 ntBASIC19.28■□□□□ 0.68
TSR3Q9UJK0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 POM121L13P-201ENST00000422362 380 ntBASIC19.27■□□□□ 0.68
TSR3Q9UJK0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 AC026366.1-201ENST00000488803 879 ntBASIC19.27■□□□□ 0.68
TSR3Q9UJK0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TSR3Q9UJK0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TSR3Q9UJK0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.27■□□□□ 0.67
TSR3Q9UJK0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TSR3Q9UJK0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSR3Q9UJK0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSR3Q9UJK0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 AC093484.2-201ENST00000580996 2166 ntBASIC19.26■□□□□ 0.67
TSR3Q9UJK0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSR3Q9UJK0 AP006587.1-201ENST00000534129 1502 ntBASIC19.25■□□□□ 0.67
TSR3Q9UJK0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 AC006058.3-201ENST00000606217 1069 ntBASIC19.25■□□□□ 0.67
TSR3Q9UJK0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TSR3Q9UJK0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.24■□□□□ 0.67
TSR3Q9UJK0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms