Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSFQ9UBX1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 FITM1-202ENST00000559294 800 ntBASIC18.28■□□□□ 0.52
CTSFQ9UBX1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 AC012306.2-201ENST00000609350 630 ntBASIC18.28■□□□□ 0.52
CTSFQ9UBX1 AC097493.4-201ENST00000641197 219 ntBASIC18.28■□□□□ 0.52
CTSFQ9UBX1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSFQ9UBX1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.28■□□□□ 0.52
CTSFQ9UBX1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.27■□□□□ 0.52
CTSFQ9UBX1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 AC011298.2-201ENST00000617989 482 ntBASIC18.27■□□□□ 0.52
CTSFQ9UBX1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CTSFQ9UBX1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTSFQ9UBX1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTSFQ9UBX1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 Z85996.1-201ENST00000494644 937 ntBASIC18.26■□□□□ 0.51
CTSFQ9UBX1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 CYP2D8P-201ENST00000433633 1490 ntBASIC18.26■□□□□ 0.51
CTSFQ9UBX1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms