Protein–RNA interactions for Protein: Q9NUQ9

FAM49B, Protein FAM49B, humanhuman

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49BQ9NUQ9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 AC073195.1-201ENST00000607241 877 ntBASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 CR392000.1-201ENST00000624770 1228 ntBASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 HLA-A-209ENST00000638375 975 ntBASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM49BQ9NUQ9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM49BQ9NUQ9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM49BQ9NUQ9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 CD177P1-201ENST00000606252 935 ntBASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 AIRN-201ENST00000601203 4374 ntBASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM49BQ9NUQ9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 AP001412.1-201ENST00000608405 714 ntBASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM49BQ9NUQ9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 KSR1P1-201ENST00000446298 240 ntBASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
FAM49BQ9NUQ9 KRT16P1-201ENST00000399124 1418 ntBASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 MIR4497-201ENST00000583208 89 ntBASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM49BQ9NUQ9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms