Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIN7CQ9NUP9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 DUSP5P2-201ENST00000426873 1033 ntBASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 AC097658.1-201ENST00000475555 843 ntBASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 AC091874.3-201ENST00000512672 1195 ntBASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LIN7CQ9NUP9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIN7CQ9NUP9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.11■□□□□ 0.17
LIN7CQ9NUP9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms