Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 WIZP1-201ENST00000531444 2299 ntBASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 AC023824.1-201ENST00000562945 2975 ntBASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42SE1Q9NRR8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 GNAS-203ENST00000306120 1878 ntBASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 HYMAI-201ENST00000635591 3347 ntBASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms