Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TEX21P-204ENST00000641479 1693 ntBASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 TFP1-202ENST00000475455 1573 ntBASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CDC42SE2Q9NRR3 AC006333.2-201ENST00000607957 2099 ntBASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF815P-204ENST00000434898 1737 ntBASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 LSM12P1-201ENST00000411836 588 ntBASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 AL049812.1-201ENST00000432563 2267 ntBASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42SE2Q9NRR3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 GPX1P1-201ENST00000388829 606 ntBASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 AC093787.1-201ENST00000450396 207 ntBASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDC42SE2Q9NRR3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms